| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1762 |
|---|
| Symbol | |
|---|
| ID | 8544144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2434241 |
|---|
| End bp | 2435479 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646386469 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_003266204 |
|---|
| Protein GI | 262194995 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.229115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0159311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGA GTTACGATAT TCCAAGGCTT TTCGCACCGG GGCCTACCTG TGTGCACGAG
CGTGTCCGCA ACGCGATGAT GCTGCCTCTC ATGCATCACC GGTCCCCGGA ATTCCGCGAG
ATCGTCGCCG AGTTACGCGC GGCCATGACG CGCCTGTGGC ACGCTCCTGA TTGGGACTGC
ATCGTAGTCC CATGCTCTGG CACAGGCGCT ATGGAGGGAG CTGTCGTCAA TTTCATGCGC
TCTGGCAGCA AAGCCATCAA CGTCAGCGGC GGCAAATTTG GCGAGCGTTG GGCCGAGATC
TTGAGCGCCT ACGGCTGCGA GGTGATTGAG GTTCGCAAGC CCTGGGGGCG GGCGGTGGCC
GTGGAAGAGC TGGCCGAGGT GCTGGAAGCG CATCCGGATG CGCGCGCCGT GTATCTGACT
AGCGCAGATA CCTCGACCGG AGTCGAGCAT CCCATTTCAG AACTAGCTGC GTGTGTACGC
CAGCGCAGTG ATGCGTTATT GATCGTGGAT TGTATCTGCG ATTTTGGCGG CGCTCGCGAT
ATCCGCCCAG TCGAATGGGG AATCGATGTC GCGGTCAGCG CTAGTCAAAA ATGTCTCGGT
GTGCCGCCGG GCCTGGGGCT GGCGGCGATC TCGCCGCGCG CGTGGCAATT TGCCGAGAGC
GCGGATCTGC CGCGCTTCTA CTTCGACTGG CAGCTCGAGG CCGAGCGCCA GCGCGAGCAC
ATTACCAAGA ACACCTCGCC GGTGAATCTC ATCCGGGGGC TGCTCGAGTC GGCGCGGATG
ATCGAAGAGG AAGGTCTGGA GCAGGTCGTG CGGCGTCACG CGCGGGTCGC AGAGGCCACC
CGCGCGGCGG TACAGGCGCT GGAGCTGTCG CTGTTCGCCG AGCTGCCCAG CAACGGACTC
ACCGTGGTCG AGATTCCAGA CGGTCGGGCA GCGGCCCTGT ACCAGGTGCT GCGCGACCGA
TACGGATATC GCGTCGCCGA GGGCCAGAAC CAGGTCAAGA ATCGCGTGCT GCGCCTGGGC
CACATGGGCC AGGTGAGCGA GGGCGATATT CTCGGCCTGC TGCACGTGTT CGAGAGCGCG
CTGGTCGATG TCGGGCTGCG AGCGCGTCAC ACCGGGGTCG CCGTGAACGC GGCGATGCAC
TCGCTGGCGC TGGCCGAGTC CGCTGCCCCG TTGGACATCG AGGGGGCCTC GAATGCTCAC
GCGCCGCCGG CGCCTGTGCT CGTGGAACAG ATGTCATGA
|
|---|
| Protein sequence | MASSYDIPRL FAPGPTCVHE RVRNAMMLPL MHHRSPEFRE IVAELRAAMT RLWHAPDWDC
IVVPCSGTGA MEGAVVNFMR SGSKAINVSG GKFGERWAEI LSAYGCEVIE VRKPWGRAVA
VEELAEVLEA HPDARAVYLT SADTSTGVEH PISELAACVR QRSDALLIVD CICDFGGARD
IRPVEWGIDV AVSASQKCLG VPPGLGLAAI SPRAWQFAES ADLPRFYFDW QLEAERQREH
ITKNTSPVNL IRGLLESARM IEEEGLEQVV RRHARVAEAT RAAVQALELS LFAELPSNGL
TVVEIPDGRA AALYQVLRDR YGYRVAEGQN QVKNRVLRLG HMGQVSEGDI LGLLHVFESA
LVDVGLRARH TGVAVNAAMH SLALAESAAP LDIEGASNAH APPAPVLVEQ MS
|
|---|
| |