Gene Hoch_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1708 
Symbol 
ID8544090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2321113 
End bp2323410 
Gene Length2298 bp 
Protein Length765 aa 
Translation table11 
GC content73% 
IMG OID646386416 
Producthypothetical protein 
Protein accessionYP_003266151 
Protein GI262194942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0193003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAG GTATTACTCG GTGGACACTG CGCGCCTCTC TGTGGGCGGG CACGGCCGCG 
ATCGCGCTGC TCGCTGCTTG TTCGGACGAT ACGCCGCCAC CGGCCGATCC CGACGCCGGC
GCGCCGGACG CCGCCGTGCC GGACGCTACG CCAGAGCCGT TGCCGGACGC GGCGCCGGAC
GCGAGTCCGG TTGCCGACGC CGGGCCACCG CCGGGCGATG GCGGCGCGGG CGATGGCGGT
GTCGAGCCGC CCGGGCCGCC GGCGGTGAAC GTGGTCTTTC CCCCGTCCGC GGCGACGCTC
ACCCGGGGCG CGTCCCTGGC GCTGCGCGGC ACCGCGCTGC CCGAGGTCGC CGCGCTGCAG
GTCGCCGGCG TCGAGGCCAC GCTGCTCGGC GATGGCGCCT GGGAGGCCGA GGTGGCGCTG
ACGCCGGGCG ACAACGCGCT GGCCCTCGCG GCCGAGGACG CGGACGGAGC GCCGCTGCCG
GTACCCGCGG CGCTGAACGT GAGGTACCAG CCGGAGCTGC TGAGCAGGGC CGAGGACATG
ATTATCGATC GCGAGGCCAA TCGCGCGTAC CTGCGCGCGC AGGTCGCTCC GCCGGCCGAG
CTGGGTCTGT GGACCGTGGA CCTGGCGACC GGCGAGGCCT CGATTCTGGG CTCGGCCGAT
GTCGGCAGCG GGCCGTGGAC GCGCTACTGG GGCGCCATGG CGCTGGATGC GGCGCGCTCG
CGCTTGCTGC TCGCCGACCC GCCGAGCGAC CGCATCGTCA GCCTCGATCT CGCGACCGGC
GAGCGCGTCG TGCTGTCGCC CGCCGACGCC GAGTACGGGC CGGCCTTTGG CACCGCCAGG
GACATGGTCA TCGACGAGCC GCACAACCGC GCGCTGTTCA CGGACAACTC GGTCGACGCG
CTCTTCGCCA TGGATCTGAG CACCGGCCAG CGGACGATCC TCTCGGATAA TTCACACCCC
GGGCCGTCGC TGATCAACCC CGGCGCGCTG GTGTACGACG CGGCCAACGA TCGCGCGCTG
GTGGCCCACT GCGTGGCCGA CGGCGACGGC GACGAGGCCG ACTGCGACCT GCTGGCGGTC
GACCTGAGCA GCGGCGCGCG CACGGTCTTC GATGTGGTCG CGCACCAGCT CGAGAACGTG
GTCGACATGG CGCTCGACCT CGAGCGCGGC CGGCTGATCA CGGTGCGCGA CGATCACTGG
GAGCTGCGCT CGGTGGCGCT CGACACCGGC GAGACCGAGG TCCTGTCGTC CAACCCGGTG
GGCGCGGGGC TGTCGTTCGA GCGCCCCGAG GCGCTGGCCC TGGCGCCCGA CGGCGAGCGC
GTGCTGGTGC TCAGCCGCGA ACACAACGCG ATCGTGGCGG TCGCGCCCGA CACCGGCGAG
CGCGCGGTCG AGTACGGCTT CTTCCTGGGC GCCGGCGTGC CTATGGGCGT GCCGCAGGCG
ATCACCCTCG AGCCCACGGG CAACAGCCTG CTGCTGGCCC ACGAGCGCAC CAGCAGCTCC
AGCCGGATCA CGCGCGTCGA CATCGCCAGC GGGCTGCGCA CGGCGGTGTC GGAACCCGGC
GTGCACGAGG GGCCGTGGCT GTACGAAGTC GTGGGCATGG CCTACGACAG CGGGCGCGAC
GAGGCGCTGG TGGTGATCGA CGACTTTGGC GTCAGGGCCA TGGCCGTGGA CCGCGACACC
GGCGTGCGCC GCGCTCTGGC CGGCCCGGAT GACGGCACCG GGACCGCGAT CTACGAGCCC
ACCGCGATCG CCTACGACCC GGTCTTCGAC CGCGCGATCG TCGCGATGGG AGACTCGACC
TCGGGCTCGC TGGTCGAGCT GCGGCTGGAC GACCTGAGCC GCCGCGTGCT CGCCGACGGC
AGCAATGAGC TGCCCGACGA GCCCATCGCC CTGGTGATGG CGCCGTCGGG CGGGTGGGCC
TACGTGCTCC ATGCCGAGAA CATGCTGAGC GCGGTGTCGC TGGACTCGGG TGAGGTCACC
GTGGTCTCCG ACGCCGTCAC CGGCAGCGGG CCGCCGCTCT ACTTCCCGCG CGCCATCGCC
TGGCAGTCGC AGCCCGAGCG CCTGCTGGTG CTCGGCTGGC ACACCGAGGG CGGCTCGTAC
AGCGTGTTCG CCGTGGATCC CAGCACCGGT GATCGCACGG AGCTGGGCGG CGCGCTCACC
GGCGTCGGGG CGCCGATCTC GTCGGCGGTC GCCATGGCTT TCGACGAGAG CGCCGACATC
GTCTGGGTGA GCGACCGCGT GCTCGGCATC GTGGCCCTGG ACCTGCGCTC GGGCGATCGC
GTGACCGTGT CGCGCTGA
 
Protein sequence
MRQGITRWTL RASLWAGTAA IALLAACSDD TPPPADPDAG APDAAVPDAT PEPLPDAAPD 
ASPVADAGPP PGDGGAGDGG VEPPGPPAVN VVFPPSAATL TRGASLALRG TALPEVAALQ
VAGVEATLLG DGAWEAEVAL TPGDNALALA AEDADGAPLP VPAALNVRYQ PELLSRAEDM
IIDREANRAY LRAQVAPPAE LGLWTVDLAT GEASILGSAD VGSGPWTRYW GAMALDAARS
RLLLADPPSD RIVSLDLATG ERVVLSPADA EYGPAFGTAR DMVIDEPHNR ALFTDNSVDA
LFAMDLSTGQ RTILSDNSHP GPSLINPGAL VYDAANDRAL VAHCVADGDG DEADCDLLAV
DLSSGARTVF DVVAHQLENV VDMALDLERG RLITVRDDHW ELRSVALDTG ETEVLSSNPV
GAGLSFERPE ALALAPDGER VLVLSREHNA IVAVAPDTGE RAVEYGFFLG AGVPMGVPQA
ITLEPTGNSL LLAHERTSSS SRITRVDIAS GLRTAVSEPG VHEGPWLYEV VGMAYDSGRD
EALVVIDDFG VRAMAVDRDT GVRRALAGPD DGTGTAIYEP TAIAYDPVFD RAIVAMGDST
SGSLVELRLD DLSRRVLADG SNELPDEPIA LVMAPSGGWA YVLHAENMLS AVSLDSGEVT
VVSDAVTGSG PPLYFPRAIA WQSQPERLLV LGWHTEGGSY SVFAVDPSTG DRTELGGALT
GVGAPISSAV AMAFDESADI VWVSDRVLGI VALDLRSGDR VTVSR