| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1643 |
|---|
| Symbol | |
|---|
| ID | 8544025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 2237683 |
|---|
| End bp | 2238444 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646386351 |
|---|
| Product | protein of unknown function UPF0153 |
|---|
| Protein accession | YP_003266086 |
|---|
| Protein GI | 262194877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0727] Predicted Fe-S-cluster oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.152267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC GTGCGCGAGA CGCTGCCAAC GATTCCATCC TTGCCTTGTT TCACGAGCTT
GACGCCGAGA CCGAGGCCTT TGCCGCGGCC ACGGGTCTGC GCTGCCCCAC GGGCTGCGGG
GCCTGCTGTG AGAGCCCGGC GATTCACTGC GCGGCGGTCG AATTCGAACC GCTGGCGCGC
GCGTTCGTAG ACGCGGGCAC CGCCGAGGCC GCGCTCGAAC GCGCCGCGGA GGCGGGCGCT
GGACCATGCA TCTTCTACGC CGCGGACGGA CCCGGTCGCG GTCGCTGCAC GGTGTACGCG
TATCGCCCGG CGGTGTGTCG GCTGTTCGGG TTTGCGGCGG TTCGCGGCAA ACTCGGTCAC
CCCGAACTGG CCGCGTGCCG GCGCCACAAA GCCGAGCAGC CCGAGGCCGT GGCGCGCGCA
CACGAGCAGG TGGCCACGGG GGCACCGGTG CCGCTCATGG GCGTCTGGCA GACGCGGGCG
GCCGAGCTGG GTACCAGCAC GAGCGGAGCC CTGTTACCGA TCAACCAGGC GATCGCGACG
GCGCTTGAAC GCGCGCTGAT GTTGACTGCG TTTGCCGGCG CGGACGCGCC GGCGAGCGAG
ACCGCCGAGG GGGCGGCCGC CGCGTCTGCC GCTATCGTCG ATCTCGCCGC GGTCCGGGCT
GCGGCGATGG CGGCGCGACG CGATGGCCCC GAAGACGACG AACCGCATCG CCCGGGTCAT
CGGCCGAGAA CTCGGCCGAC CTCGCCGCGT CGCGCCGCGT AA
|
|---|
| Protein sequence | MNRRARDAAN DSILALFHEL DAETEAFAAA TGLRCPTGCG ACCESPAIHC AAVEFEPLAR
AFVDAGTAEA ALERAAEAGA GPCIFYAADG PGRGRCTVYA YRPAVCRLFG FAAVRGKLGH
PELAACRRHK AEQPEAVARA HEQVATGAPV PLMGVWQTRA AELGTSTSGA LLPINQAIAT
ALERALMLTA FAGADAPASE TAEGAAAASA AIVDLAAVRA AAMAARRDGP EDDEPHRPGH
RPRTRPTSPR RAA
|
|---|
| |