Gene Hoch_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1601 
Symbol 
ID8543983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2191164 
End bp2191802 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID646386309 
ProductMethyltransferase type 11 
Protein accessionYP_003266044 
Protein GI262194835 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.624379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.990626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCG ATCATTACTA TAGACATCTC GCCGTAGCGT ACGCGCGCGG TCGCTGCCCC 
GAGCTGGCCG AACTCGACGA CGACGCCCTG CTCGCGAGCG CGCGCGCGCA GGGCGTGCGC
ATGCACCGCT TCAAGCGCAC CGCCGAGTTG CCGCGGGTGC GCCGCGTCCT CGGCGTGCTC
AAGGGCTTTG CACCGAGCAC CCTGCTCGAC ATCGGCAGCG GCCGCGGCGC GTTTCTGTGG
CCGCTGCTCG ACGAATTCGC CGCGCTTCGC GTCACCGCCA TCGACGTGCT CGCGCATCGC
GTCGCCGACA TCGAGGCCGT GCGCCGCGGC GGCGTCCAGC GCCTCGACGC GCGCCAGGTC
GAGGGCGAGG AGCTGCCCTG GCCCGACGAC AGCTTCGACG CAGTGACCAT CCTCGAGGTC
CTCGAACACG TCGCCGATCC CGCGCCCGTG GCCGCCCAGG TGGTGCGGGT GGCGCGCTCG
CTGGCCGTGG CCACCGTGCC CGCGAAAGCG GACGACAACC CCGAGCACAT CCGCCTGTTC
ACGCCCGCCA CGCTCACCGA GCTGTTCGAG CGCGCGGGCG CGCGCGCGGT GCGCATCGAA
CACGTGCTCA ACCACATGGT CGCCGTGATC AAGCCGTGA
 
Protein sequence
MDPDHYYRHL AVAYARGRCP ELAELDDDAL LASARAQGVR MHRFKRTAEL PRVRRVLGVL 
KGFAPSTLLD IGSGRGAFLW PLLDEFAALR VTAIDVLAHR VADIEAVRRG GVQRLDARQV
EGEELPWPDD SFDAVTILEV LEHVADPAPV AAQVVRVARS LAVATVPAKA DDNPEHIRLF
TPATLTELFE RAGARAVRIE HVLNHMVAVI KP