Gene Hoch_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1496 
Symbol 
ID8543878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2031508 
End bp2032302 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID646386206 
ProductDNA polymerase beta domain protein region 
Protein accessionYP_003265941 
Protein GI262194732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0393169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC TCAGCAGTTT GCCCGCCCGA CACCGCAGCT TCGCCGACGA CTTCATCGCC 
GCAGTCCGCC AGGATCCGCG TATCCGCGCA CTGCTCGCTG GTGGCTCACT GGTCCACGGC
GGTTTCGACG AGCTGTCCGA CCTCGATTTC GTCGTCGTGG TCGAGGACGC CGAGTACGAC
GCGCTGCTGG GCGATCGCGC CGCCTTCGCC CGCGCGCTGG GCCCGCTGCT GAGCGCGTTC
ACGGGCGAGC ACGTCGGCGA GCCGCGGCTG CTCATCTGCC TGTACGGACC GCCGCTGCTG
CACGTGGACC TCAAATTCGT ACGCGAGCGC GATCTTGCCC GCATGGTGGA ACGCCCGGCC
GTGCTGTTTG CGCGCGACCC GGCGGCGCTC GAGGCCCGCT TGGCCTCAGC CACCATCGCC
TGGCCCGAGC GCCCGCCGCA GTGGTTCGAA GACCGGGCGT GGACCTGGCT GCACTACGCC
GCGACCAAGC ACCTGCGCGG CGAGTTCTTC GAAGCCATCG GCATGCTCGC CCTGTTCCGC
GACCAACTTC TCGGGCCCAT GCTGCACCGC CACGCCGGCC GCCCCCAGCG CGGCGCCCGG
CGTCTCGAGA GCAGCTCGCC AGAGGCCGCC GCTCGCCTGC GCGCGACCCT GGCCGGGCAC
GACGCGGGCT CGCTCGCCGA CGCCATCGAG GCTGCGATCG ACTTGTATCT CGCGCTCCGC
GAGGACGCCC CTCCGGAGCG CCCGGTGCCG CACATGCCCG CAGCGCTGCG CGCCTTTGCC
CGCGCCGGCG ATTGA
 
Protein sequence
MTTLSSLPAR HRSFADDFIA AVRQDPRIRA LLAGGSLVHG GFDELSDLDF VVVVEDAEYD 
ALLGDRAAFA RALGPLLSAF TGEHVGEPRL LICLYGPPLL HVDLKFVRER DLARMVERPA
VLFARDPAAL EARLASATIA WPERPPQWFE DRAWTWLHYA ATKHLRGEFF EAIGMLALFR
DQLLGPMLHR HAGRPQRGAR RLESSSPEAA ARLRATLAGH DAGSLADAIE AAIDLYLALR
EDAPPERPVP HMPAALRAFA RAGD