| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1448 |
|---|
| Symbol | |
|---|
| ID | 8543830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 1960981 |
|---|
| End bp | 1961610 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646386160 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003265895 |
|---|
| Protein GI | 262194686 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.356724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TACTGGTGTT GGGTGCCTCG GGGCTCAGTG GAGCCAAGGT CGTCGCCGAG
CTGTGCGCGC GCGCGTATGT CGCCGTCGTC CTGTATCGCT CGGCGAAGCC CGCGTTTGAT
TTCCAGACGG TGGAGTACGT CCAGGGCGAT GCCACGCGCC ACGACGATCT CGTACGCGCG
CTCGACGGTG TCGACGGCGT GATCAACTGC ATCGGGTTTG GCAAAGGCAC GGGCAAGGCG
ACGAGCTTTT TCTCGGACGT AGGCCAGGCG CTGATCGAGG CGATGAAGGA ACGCGGCGTG
ACGCATCTGG TGACGATGTC CAATATCGGT GTGTTCAAGA CCGGAAATCG ATTTATCTAC
GGCGGGCTCG TGCCTATCGT CATGCGTTGG CTCAAGCACA TCATCGACGA CAAGGAGCGG
CTGGAAACCG CGCTGGCAGG GGAACGCGAG ATTCAGTGGG TGTGTGCGCG CTTTCCGAAT
ATCGTCGAGG GGCCGGCGCG CGCGACCAAA TGCGACGAGG ACGGCAAGTC GGTGTCGCTC
TCGATCACGA GCGAGTCGAT GGCCAAGGTG CTGGTCGATT TGCTCGCAGA CGAGCAGCGC
CGCGGCGTGT GTCTGTGCTT TAGCAACTGA
|
|---|
| Protein sequence | MKRVLVLGAS GLSGAKVVAE LCARAYVAVV LYRSAKPAFD FQTVEYVQGD ATRHDDLVRA
LDGVDGVINC IGFGKGTGKA TSFFSDVGQA LIEAMKERGV THLVTMSNIG VFKTGNRFIY
GGLVPIVMRW LKHIIDDKER LETALAGERE IQWVCARFPN IVEGPARATK CDEDGKSVSL
SITSESMAKV LVDLLADEQR RGVCLCFSN
|
|---|
| |