Gene Hoch_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1442 
Symbol 
ID8543824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1952629 
End bp1953546 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID646386154 
Productprotein of unknown function DUF808 
Protein accessionYP_003265889 
Protein GI262194680 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.34086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCCA GTCTGCTAGC ACTTCTCGAC GACATCACCA CCGTCCTCGA CGACGTCGCC 
GTTCTCACCA AGATCGCGTC GAAAAAGACC GCCGGCGTCC TCGGTGACGA CCTCGCGCTC
AACGCCGAGC AGGTCACGGG CGTCAAGCCG GACCGCGAGC TGCCGGTGGT CTGGGCGGTG
GCCAAGGGGT CTGCCCTCAA CAAGCTCATC CTGGTACCGG TCGCGGTCGC CATCAGCGCG
GTGGCGCCGT GGGCGGTGGT ACCCCTGCTC ATGCTCGGCG GCGCGTTTTT GTGCTTCGAG
GGCTTCGAGA AGGTCGCGCA CAAGCTGCTG CACAGCCGCG AGGAGGACGA GAATCACCGC
AAGGCGCTGA ACCAGGCGGT GCGCGATCCC GAGGTCGATC TGGTAGCGCT CGAACGCGGC
AAGATCAAGG GCGCGATCCG CACCGACTTC ATCCTCTCGG CCGAGATCAT CGTCATCTCG
CTGGGCACGG TCAGCGACGA GACCCTGGGC ATGCGCCTGG CGGTGCTCGC CGCCATCGCC
GCCATCATGA CCGTCGGCGT CTACGGTCTG GTCGCCGCCA TCGTCAAGCT CGACGACGCC
GGGCTCAGCC TGAGCAAACG CGAGAGCGGC TTTGCCCGCG GGCTCGGGCG GGCGATCACG
GTCGGCGCGC CGTGGCTGAT GAAGATCCTG TCCATCGCCG GCACCGCGGC CATGTTCCTG
GTCGGCGGCG GCATCTTGGT GCACGGCATC GCGCCGATCC ATCACCTGGT GGTGGACGCG
GCCGAGGCCG TCGGCGGCGT GCTGGGCTCG CTCATCGAGA TGGCGCTCAA CGGCCTGGTC
GGCATCGTGG CCGGCGGCGT GATCGTCGCC CTGGTCACGC TGGTCAAGCG GTTGCGCGGC
AAGCCGGCCG CGGCCTGA
 
Protein sequence
MASSLLALLD DITTVLDDVA VLTKIASKKT AGVLGDDLAL NAEQVTGVKP DRELPVVWAV 
AKGSALNKLI LVPVAVAISA VAPWAVVPLL MLGGAFLCFE GFEKVAHKLL HSREEDENHR
KALNQAVRDP EVDLVALERG KIKGAIRTDF ILSAEIIVIS LGTVSDETLG MRLAVLAAIA
AIMTVGVYGL VAAIVKLDDA GLSLSKRESG FARGLGRAIT VGAPWLMKIL SIAGTAAMFL
VGGGILVHGI APIHHLVVDA AEAVGGVLGS LIEMALNGLV GIVAGGVIVA LVTLVKRLRG
KPAAA