| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1424 |
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| Symbol | |
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| ID | 8543806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1922302 |
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| End bp | 1923855 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646386136 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003265871 |
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| Protein GI | 262194662 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.155196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATC GATACGCGCG AATGGTTAGC TGTGTTTGCT TTGCTTCTCT GGCACTGCTC
GCCACGTGCA GCAGGCTTGA TTGGACTTAC GTCCAATGCG ACGATGGCTC GGTCTGCCCG
ATAGACTACA CGTGCTTCAA AGCAGCGGAG AAGAGAACAG GTTGCACGCA CGACTCCTTG
GTAGAACGCT GTCAGGCGAC CTACCCGGAG GATCTTTTCG AGCAACTCAA GGATTCCTCG
AAGGAGAATG AATTCATTCT CCTCGGTACG ATGTTCGATC AGTCGGACTT GGTGCTCGGT
AAACTCCAGT CCATCGTCCA GTTTGGCTTC GAGCAAATCA ACGATGTTGG CGGCATCGAT
GGGCGTCAGT TTGGCGTCAT CTCGTGCGAC ATTGAGCCCG ATGATGTCGC GAAATCGGGC
GCGAGCTACG CTCGTAGCGC AGACGTGGCA GCGGAGGTTG CGCCGTATCT AGCGAGAAGG
TATGGGGTCA AGGCGATCGT TGGTGCGGGC AGCTCCAGTG CTACGAAGGC TGCGTTCGAG
GCGCTTCAGG ATCTAGATGG GGATATCCCC TTGATGGTCT CCCCCTCTGC CTCCAGTCCG
CTGCTGACAG AACTCGAGTC CGCGTTTGCG AGTGACGCCG CACCTGGCAT GCTCTGGCGT
GCCGCGCCGG CAGATGAGTA CCAAGGCAAG GCCATCGCTC ACGCGATGGG TTGTCGTTCG
GAGGGGGCAG CCGGAAAGGT CGCCGTCATC TACGTGAAGG ACGATCCGTA CGGACAAGGG
TTGTTCGAGG TGGTTGCAGC GTCCTATGAG GGGGAAGGCG TGGAAGCGTT TACGTTCGGG
CAGACGAGCG AGATTGACAT GCTTGTGGGA GCGCTTGGAT CTCGTGAGCA CGAGCAAGTA
CTCTTCATCT CGGTGCAGAA TAGCGACATT CGTGAGTTCC TCGAAGCAGT GAGCACGCGG
AGGGATTCGT TCGCAACAAA GAAGATTTTT TTGACCGAGA TGGCGGCAAC CGATGCGGCG
CTGGCCACAA TCGCGCCCTT CGTGCGTGAG AACCTTCTCG GCTCGCGTCC CACTCCGCCT
GATCTCTATT CGGGTCTCTC CACCTATCGC GCGTTTCTCG ACAGCTACGC GGAAGCGCAC
GGTGAGTACC TGATCGACGA GATCTTCACG GCGAACGCTT ACGATGCCGC TTGGCTGGTG
GTGTACGGTG CGGCCTGGGC GGTCTTGGCC GAGGGCGAAC GCGACGTCGC TGCGCTGTCG
TCCAAGACCA TGGCGCGCGG GTTGCGCGAG CTCAGTGACC CGGAGGGCAA ATCCATCGAT
GTCGGCCCCG ATGCCTGGCC GACGCTTGTC GAAGAATTCA GAGCCGGCCG CCCGGTCAAT
ATCTCCGGCG CATCGGGCGA GCTCGACTAC GATCCCGACA CCGAAGAACT CGCGACGAGC
ATCCAGATCT GGAACCTCGA CGAAAACAAC AACATCGACC CCGTCTACAC ATGGCCGGAA
GAGCCCGACC CCGCCTGCGT CGGCGCCGCG TCGACCCTGC GGCCGCACAT CTGA
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| Protein sequence | MNYRYARMVS CVCFASLALL ATCSRLDWTY VQCDDGSVCP IDYTCFKAAE KRTGCTHDSL
VERCQATYPE DLFEQLKDSS KENEFILLGT MFDQSDLVLG KLQSIVQFGF EQINDVGGID
GRQFGVISCD IEPDDVAKSG ASYARSADVA AEVAPYLARR YGVKAIVGAG SSSATKAAFE
ALQDLDGDIP LMVSPSASSP LLTELESAFA SDAAPGMLWR AAPADEYQGK AIAHAMGCRS
EGAAGKVAVI YVKDDPYGQG LFEVVAASYE GEGVEAFTFG QTSEIDMLVG ALGSREHEQV
LFISVQNSDI REFLEAVSTR RDSFATKKIF LTEMAATDAA LATIAPFVRE NLLGSRPTPP
DLYSGLSTYR AFLDSYAEAH GEYLIDEIFT ANAYDAAWLV VYGAAWAVLA EGERDVAALS
SKTMARGLRE LSDPEGKSID VGPDAWPTLV EEFRAGRPVN ISGASGELDY DPDTEELATS
IQIWNLDENN NIDPVYTWPE EPDPACVGAA STLRPHI
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