Gene Hoch_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1414 
Symbol 
ID8543796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1900654 
End bp1901079 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID646386126 
Productcupin 2 conserved barrel domain protein 
Protein accessionYP_003265861 
Protein GI262194652 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA AACGAAACGG AGCCCGACCC TCACAAAAAG GGCCGCCCGA GCATTTCACT 
GGCACGGTGC GCATCGATCC CCTGTTTCAA GCGAGTGAGC CCGCGCGCGC GAGCGGCGCG
TACGTGACCT TCGAGCCCTG CTCGCGCAGC GACTGGCACA CGCATCCGCT GGGCCAGACG
CTCATCGTGA CCTCGGGTTG CGGGCTGCAC CAGCGCTGGG GCGGGGCGAT CGAGGAGATT
CGCCTCGGCG ACGTGGTAAC CGTCGGGCCG GACGAAAAAC ACTGGCACGG CGCTGCACCG
ACGACGGCGA TGACGCATAT CGCGATTCAG GAAGCGCTCG ACGGACGCGC TGTCGACTGG
CTGGAGAAGG TCAGCGACGA GCAGTACGAG GGCGAACGCG CGGCAGCGTC CGCGGACGAC
GAATAA
 
Protein sequence
MDIKRNGARP SQKGPPEHFT GTVRIDPLFQ ASEPARASGA YVTFEPCSRS DWHTHPLGQT 
LIVTSGCGLH QRWGGAIEEI RLGDVVTVGP DEKHWHGAAP TTAMTHIAIQ EALDGRAVDW
LEKVSDEQYE GERAAASADD E