| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1388 |
|---|
| Symbol | |
|---|
| ID | 8543770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 1856353 |
|---|
| End bp | 1856937 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646386100 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003265835 |
|---|
| Protein GI | 262194626 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAAC GCGAGAATGA CAGCGCGAAC GGCTACGAAG CCGCAGCCAG GGCGTTCATC
GCGCAGCGTT CGGACATCGG GGCGAATACG GTGCGGGAGT GGGCGCGCGC GCTGCCCGCG
GCGGCCGCGA TCCTCGATCT CGGCTGCGGT CACGGCTGGC CCAACGCGCA CGCGCTGCTG
AGCACGGGAT ACGCGGTCTA CGGTGTCGAT GCCGCGCCGG CCTTGGTCGC CGAGTTCCGC
CGCCGCTGTC CGCAGGTCCA GGTGGCCTGC GAGAGCCTCG AGGAATCGCG CTTTTTCGGA
CGTAGCTTCG ACGGCGTCAT CGCCATCGGC GTGATGTTCT TGCTGCCGGC CGACACGCAG
CGCGCCCTCA TCGGAAAGGT CGCGACGGCG CTGCGCCCGG GCGGCCGCTT TCTGTTCAGC
GCGCCGGCCG AAAATTGCGC ATGGACCGAC GTATTGACCG GCCGCGCATC GCGGTCTCTC
GGCGCCCGCG TGTACCGGGA GGCGCTGGCC GAAGCCGGGC TCACACTCGT CGGCGGCTAT
CGCGACGAGG GCGCGAATCA CTACTACGAC GCTGTGCTCG CGTAG
|
|---|
| Protein sequence | MAKRENDSAN GYEAAARAFI AQRSDIGANT VREWARALPA AAAILDLGCG HGWPNAHALL
STGYAVYGVD AAPALVAEFR RRCPQVQVAC ESLEESRFFG RSFDGVIAIG VMFLLPADTQ
RALIGKVATA LRPGGRFLFS APAENCAWTD VLTGRASRSL GARVYREALA EAGLTLVGGY
RDEGANHYYD AVLA
|
|---|
| |