| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1318 |
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| Symbol | |
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| ID | 8543700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1745362 |
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| End bp | 1746690 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646386034 |
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| Product | CRISPR-associated RAMP protein, Cmr1 family |
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| Protein accession | YP_003265769 |
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| Protein GI | 262194560 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1367] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01894] CRISPR-associated RAMP protein, Cmr1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGT TCTGCCACAC AGATGGATTC CCCCACCCCT TCGAGGCCCA CATGATTCGC
ATGGTAGCCG ACTACGAGCT GGTCACGCCC GCCTTCATCG GTGGCGCCGA CAACCAGACA
GGTTTTCCGG AACTGCGCGT GCCCAGCATC AAAGGCGCGC TGCGCTTCTG GTGGCGGGCG
CTCCGCTGGC GCCAGGGTAT CTCTGTCGCG CAACTGCGCG AGCAGGAGGC CAGGCTCTTT
GGCAGCGCAG ACAGCACGAT CGGACGCTCG CGCGTGAGCC TGGCCCTCAC GGGAATGACT
CCCTCGAGCG GCGCCAAGGT CTCCAAGCGG GGAGCCAAGG TGTCCGAATT GTTCGACGCT
GCGGGAGCGC GCACCACGCA GCAGCGGCGC CAACCCGCGC CGGGACTCAC CTACCTCGGC
TACGGCTTGG TCACCGCCAA AGACGGCAAA CTCGAGCGCG GTTGCCTGCG CCCGCCGCTC
GCGTTCCAGC TCTCGCTCAT GTTCGACCCC CGCGAGCGAC AGGACGCCAA AGCGCTCACC
GAGCAACTCG CACAAGCAAT GCAGGCGCTG GGCCTGCTCG GCGGCCTGGG CGCGCGCTCG
CGGCGGGGAT TTGGCAGCGT TGCGCTACGC GCTCTGCGCA TCGACGGCGA AAACGCATGG
GAGGCACCGA AAACGCCCGG CGAGCTCGTC AAGCGGATCC GGGCCTTGCA CGGCAACGAC
ACGCGCAGCA GCGACAGCGG CCCGACTCCG CTGCCCGAGT GGACAGCCCT GTCCGCGCGC
ACGCGCCATC TCGTACTGGT TGGCCGCCCC GACGCCCAGG ACGGAACTCC CACTCACTTG
CTCGAACAAC TCGGCCAGGA GTTGGTGCGA TTCCGCAGCT ACGGTCGAAA CAATAAAATC
CTGGGCAACG AAACCCCTGA GCGGCGCTTT GCCGACGATC ACCATCTCTT CAAGGATGTG
CTCAAGGGGA AGCGCCCACA AACGCATCCG CGCCGCGCCG TGTTCGGCCT GCCCCACAAC
TACTACAGCA GCAGCGACAG GAAGGGTATG CAGGTGCAGC CGCGAGCGCA CAAGCTGGAT
CGCCGCGGCA GTCCGCTGCT GGTTCACGGC CACCGCTGCG ACCAGACGCC GGTGCTCGTG
CTCAGCTTCT TGCCCGCGCG CTTCCTACCC GAGCGGCGGA ACAAAATCAG CGTCGCCAGA
CACGCGGTCC CACTGCGACC CGACGAGGAA CTGTGGCGCC CCATCAGCGA GTTCCTCGAC
CGCGTACGAG CACCATCGCG TCGCGACCAT CTCAGCATCA CCGATGCGTA TGAGGTACCT
GCGCCATGA
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| Protein sequence | MDAFCHTDGF PHPFEAHMIR MVADYELVTP AFIGGADNQT GFPELRVPSI KGALRFWWRA
LRWRQGISVA QLREQEARLF GSADSTIGRS RVSLALTGMT PSSGAKVSKR GAKVSELFDA
AGARTTQQRR QPAPGLTYLG YGLVTAKDGK LERGCLRPPL AFQLSLMFDP RERQDAKALT
EQLAQAMQAL GLLGGLGARS RRGFGSVALR ALRIDGENAW EAPKTPGELV KRIRALHGND
TRSSDSGPTP LPEWTALSAR TRHLVLVGRP DAQDGTPTHL LEQLGQELVR FRSYGRNNKI
LGNETPERRF ADDHHLFKDV LKGKRPQTHP RRAVFGLPHN YYSSSDRKGM QVQPRAHKLD
RRGSPLLVHG HRCDQTPVLV LSFLPARFLP ERRNKISVAR HAVPLRPDEE LWRPISEFLD
RVRAPSRRDH LSITDAYEVP AP
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