Gene Hoch_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1265 
Symbol 
ID8543647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1668192 
End bp1668641 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID646385983 
ProductPolyketide cyclase/dehydrase 
Protein accessionYP_003265718 
Protein GI262194509 
COG category[S] Function unknown 
COG ID[COG4891] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0100939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG CTACCAAGAA CGAGAGCACC TTCCGCCTTT CCTACTCCGT CGCCGTATCG 
ATCGCGGCCA AACCCGAAGA GGTCTGGGCC CGGCTGACCG ATGCCGCCGC CTTTCCGAGC
TGGAACACCA CCGTGACCAG CATCGAGGGC GAGATCGCCG AAGGCCAGCG CCTCGCCATT
CGCGTCCCCG TGGCCCCGGG GCGGGTGTTC AAGCCCCGCG TCACCGAGTT CGAACCCGCG
CAGCGCATGG TGTGGAGCGA CGGCATGGCG CCGATGTTCA AGGGCGAGCG CCGCTTCGTC
GTCAGCCCTA CGGGCGACGG CGGCACCGAG TTCACCATGT CCGAGACCTT TGCCGGCTTG
ATGCTGCCCA TGATCAAGAA GTCGCTGCCG GATTTCGGCC CGGTGTTCGA GCAGTACGCC
CAGGACCTCA AGCGCGCCTG CGAAGCCTGA
 
Protein sequence
MSAATKNEST FRLSYSVAVS IAAKPEEVWA RLTDAAAFPS WNTTVTSIEG EIAEGQRLAI 
RVPVAPGRVF KPRVTEFEPA QRMVWSDGMA PMFKGERRFV VSPTGDGGTE FTMSETFAGL
MLPMIKKSLP DFGPVFEQYA QDLKRACEA