| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1263 |
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| Symbol | |
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| ID | 8543645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1663959 |
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| End bp | 1665359 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646385981 |
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| Product | putative transcriptional regulator, RpiR family |
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| Protein accession | YP_003265716 |
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| Protein GI | 262194507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0248701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT TTTCTCGCCG TAGTTTCCTG CGCGGTCTGT CCCTCGGAGC CGGGGCCGCG
ATGCTGTCGC CGCTGGTCTC GCGCCTGGCC TCGGCCGAAG ACACCCTGCC CCGACGTTTC
GTCTTCGTGG TGGAAGGCAA CGGCTTCGAA CCCATCACCA TGCTGTCGAG CGGCGCGCGC
GCGGCCCTCG ACCCGACCCT GAAATCGCCG GTCGGCGACC GCCGCTGGTG GTATCGCGAC
TACCAGCACG ACACCCCGCT GGAGGTCGAG AGCAACGATC TCGGCACCGC GCGCTCGCTC
GGCGGACTGC GCGCCCTGGG CCTCGAAGAC CGCGCCAGCG TGGTGCTCGG GCTCAGCTCG
AAGGTCTCGG GCGGCGGCCA CTCCAACGCC CACGGCTGCC TCAGCTCCAG CCGCAGCATC
GCCGGTTCGC CCGGCGGCCC CACCATCGAC GCCACGATCA GCGAGGTGTC GGTGGGCAAG
CCCTTCGACG CCGTCCGCCT CGGCGTCGGC ACCGGCAACA GCCTCAACTT CGGCACCGTG
GCCTATGACG CCGGCCGCCC CGCGCCCATG ATCCTCAAGC CGGCCACCGC CTACGGCATC
TTGTTCGGCT CGGTGGGCGG CAGCACCGAC TTCGCCAACC GCGGCGACCT GCTCGACTTC
GCCGCCGCCG ACGTGGCCGC GGTCCGCAGC CAGCTTCGCA GCGGACCCGA GCGCGACAAG
CTCGAGGCCT ACCTGGCCTC GCTCGAGGAG CTGCGCGGAC GCCAGGACAC CCTGGAGCGG
CTCAGCGGCC AGCTTCAGGC GGTGGCGCCC GAGGATCCCA GCACCAACCC GCTGTACCAG
AGCCCCGACG CGCTCGACGT GTTCGCGGCC CAGGCCGAGC TGGCCACGGC CGCGCTGCTG
GGCGAGCTCA CCAACGTGGT CGTGCTCGGC TCCGGCACCG GCGGCGACTT CAACCTCACC
TATCACTCGG TCGCCGAGCA GCGGCGCCAC GACATCCAGC ACGGCTCCGC CGGCAGCGCC
GAGATGCTCG AGGCCGCGCA CACGGTCAGC GAGCGGCAGG TCGAGATCTT GGCCCAGATG
GCGCGCACGC TCGCCGACAC GCCCGAGCCC ACCGGCGGTT CCATGCTCGA CCACACGCTG
ATCGTCTACG TGTCCGAAAA TGGCGAGCAG CACCACTCCA CCGCCAGCGA GTTCCCGGCG
CTGCTCATCG GCGGCGAGGC TCTGGGCATG CGCCAGGGCG GCCGCAGCGT CATCTACCCG
GGCTACAACT CGGGCGGTCA CCGCCAGCTC TCGAACCTGT GGAACTCGGT CGGCTACCTC
GCCGGCATGG AACTCGACGA GTTCGGCACC GAGGGTCCCG GCCGCCAGGC CGCCGGTCCG
CTGAGCGAAC TCTTCGCCTG A
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| Protein sequence | MIRFSRRSFL RGLSLGAGAA MLSPLVSRLA SAEDTLPRRF VFVVEGNGFE PITMLSSGAR
AALDPTLKSP VGDRRWWYRD YQHDTPLEVE SNDLGTARSL GGLRALGLED RASVVLGLSS
KVSGGGHSNA HGCLSSSRSI AGSPGGPTID ATISEVSVGK PFDAVRLGVG TGNSLNFGTV
AYDAGRPAPM ILKPATAYGI LFGSVGGSTD FANRGDLLDF AAADVAAVRS QLRSGPERDK
LEAYLASLEE LRGRQDTLER LSGQLQAVAP EDPSTNPLYQ SPDALDVFAA QAELATAALL
GELTNVVVLG SGTGGDFNLT YHSVAEQRRH DIQHGSAGSA EMLEAAHTVS ERQVEILAQM
ARTLADTPEP TGGSMLDHTL IVYVSENGEQ HHSTASEFPA LLIGGEALGM RQGGRSVIYP
GYNSGGHRQL SNLWNSVGYL AGMELDEFGT EGPGRQAAGP LSELFA
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