Gene Hoch_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1247 
Symbol 
ID8543629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1639162 
End bp1639824 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID646385965 
ProductProtein of unknown function DUF2490 
Protein accessionYP_003265700 
Protein GI262194491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.709526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAT CATCGATACT CCGATTATTA TTCACGTTGA GCCTGAGTCT GGGTCTCTGG 
GGCCTGGCGG CGACGGCGCG AGCCGACACC GGCAGCAGCA GCAATCTGCT CGTCCGCGTC
TCGCTGCACG AACGCGTGTT TCTCATCTCG CGCTCCAATC TGGCCACGCG CGACGGCGTT
GGCGACCTGT TCTTCGGCTA CACCGGCGGC GGCCTCGGCT TCGCGCTCAG CGAGCAGTGG
AGCCTGCGGG CCGCCTACCG CCGCGCCTGG ATCCGGCCCC AGGACGACTG GTTGCCCGAG
AATCGACTGT TCGCCGAGGG CTACTTCGCC GACGTCCTGG CCGGCGTGCG CCTCACCAGC
CGCAGCCGCT TCGAGTTTCG TTTTTTCGAC CACCGGGACG ATGATGTCCG CATTCGCAAC
GAGTTCACGG TGCAGGGGCC GTGGCGGCTC ACGCCGCTGG CGCTGCGCGT CTACGCCGAG
GAGGAGTTTT TCCTCAGCGT CGGCGAGCGC CACCTCGAGG CCAACTGGCT CGGCGCCGGG
CTGGCCTGGT TTCCCCGCCA GGGCGTCAAG CTCAAGCTCG GCTATCGCTG GGTGCACCAG
CGCATCGGCG ACGCATTCAT CGACCGCCAC ACCCTCGTCA CCGGCGTAAA TCTATTTTTC
TGA
 
Protein sequence
MSRSSILRLL FTLSLSLGLW GLAATARADT GSSSNLLVRV SLHERVFLIS RSNLATRDGV 
GDLFFGYTGG GLGFALSEQW SLRAAYRRAW IRPQDDWLPE NRLFAEGYFA DVLAGVRLTS
RSRFEFRFFD HRDDDVRIRN EFTVQGPWRL TPLALRVYAE EEFFLSVGER HLEANWLGAG
LAWFPRQGVK LKLGYRWVHQ RIGDAFIDRH TLVTGVNLFF