Gene Hoch_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0884 
Symbol 
ID8543266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1145565 
End bp1147475 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content65% 
IMG OID646385655 
Productserine/threonine protein kinase 
Protein accessionYP_003265390 
Protein GI262194181 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCC ACACCTTGCG AGGCTACCGC GTCGTGGAAG AACTCGGCGC GGGCGGTATG 
GGCATGGTGT ATATCGCCAA GCACGAGCTC ATCGGCAAAC AGGCCGCGGT CAAAGTGCTG
CTTCCCGAGT ACTCCCGCGA CCCGAGCGTG GTCCGCCGAT TCTTCAACGA AGCGCGCGCT
GCCACGCAGA TACAGCATCC CGGCATCGTC GAGGTGTTCG ACTTCGGCTA TCACGACGAT
GGCAGCGCCT TCATCGTCAT GGAGCTCTTG CGAGGCGAGC CGTTGTCCGA ACGCCTGGAA
CGCATGGGCC GCTTACCCAC CGGCATGGCG CAGCGCTTCG TCCTGCAGAT CGCCGGTGCC
CTCGGTGCCG CGCACGCCGC CGGTATCGTC CATCGAGATC TCAAGCCCGA CAATATCTTC
GTCGTACACG ACCCCGACGT AACCGGTAGC GAGCGCGCCA AGGTGCTCGA TTTCGGCATC
GCCAAACTCG CCGGCGAGAT GAGCGCCGAG GAACTCAAAA CACGCACGGG CATGGTCGTC
GGCACGCCAC GCTACATGGC GCCTGAACAA TGCCGCGGCG CACGTGAAGT CGACCACCGC
GCCGATCTCT ACGCGCTGGG ATGCATATTC TACGAGATGC TATGCGGTCG GCCGCCCTTC
CAGGAAAAGG GAATCGGCGA CCTGTTCGCC GCGCATATGT TTCAGCCTCC AGCGCCGCCG
AGCAGCATCG ATCCCGAGAT TCCGCCAGAC CTCGAGGCCG CGCTGCTGAG TCTGCTCGCT
AAAGAGCCCG AACAGCGTTT TCCCAGCGCC GCGGCACTGT CGAAGGCGCT CGAACGACCC
GGCATGGACT CAACTTCTCG CACGCGTGTC GCGTCGGGCG ATAGTCCGCC GTCCGAGCGC
ATGGCGACAG CGCAACCGAC CACGCTGGGT ACATCCGCAG CGTCGGTCGC CGCCTCCTCG
CACATCCGAC AAGGTGTTCG ATGGCCCTGG ATCGCTGCCG CGAGCATGGC ACTCGTGACA
GGGCTTGGCG TCGCGCTTGC GTTTACGACG AATGGCGAAC CTGCCGCGAC AAGCGCAGCG
AGTACGCTCC CGCGAGATCC GCCCGCAGCC GACAAAGCAT TGACGAACGA CGCCGCAGAC
CCAGAGGAGA GCAATCGTTG GGTGCGCATC ACACCTCCGA CGCAGCGCTT GATTCTTGGA
ATTTCCGCAG AGACGGCCGA AGCTACCGAG GACGCCATAG GCCTGCGGCC CGAACGGCAG
GTCGAGGCCC CCAGCGCGAC GTACGAAATC CAGCAACACG AGGTCACGTG GAGCGAACTT
GAGCCGTGGC TCTCGGATAA CCCAGAGGCC ATCGTGTATC GCCCGGACTG GGTCCCTGAA
GCTCCCGAAG CACGGGCCGA GCTCGCCGCG ACCGGCATCC CGTGGGATAC AGCGTACTCC
TACTGTCGCG CTATCGGCGC GCGCCTGCCC ACGGAGGCTG AGTGGGAATA CGCGGCGCGG
GGCAGCGAAC GTCGCTTCTA CACGTGGGGA CCCGAGCGCC TCGACATCCG CCGCACCAAC
GCCTATCGCG GCGAGGATGC GCGCATCGCG CAGGTCATGA GCGGCGACCA GGATCGTACG
CCGGGTCCGA CGCCCGATGC GCTCTACGAT ATGATGGGCA ACGCTCAGGA GTGGGTCGCC
GATCTGTGGC GCAACGCTCG GCCGGGTGAT AACGAATCCT GGGTGCAAAC GGCGGACGCT
ACGTTTCGCA CGATTCGCGG CTTGCCGCTC AATCAAGCGC TTCCTGCGTC GCTACCGCGC
GAGGGTGCAG CCTACCGCGA GGCCCTGTGC GCTTCGCTGA GTTGCTTCGA AGGCTCAGAG
CAGGCGCTCG CCTATCAGGG ATTCCGCTGC GCCCGGGACG CAGCACGATG A
 
Protein sequence
MIGHTLRGYR VVEELGAGGM GMVYIAKHEL IGKQAAVKVL LPEYSRDPSV VRRFFNEARA 
ATQIQHPGIV EVFDFGYHDD GSAFIVMELL RGEPLSERLE RMGRLPTGMA QRFVLQIAGA
LGAAHAAGIV HRDLKPDNIF VVHDPDVTGS ERAKVLDFGI AKLAGEMSAE ELKTRTGMVV
GTPRYMAPEQ CRGAREVDHR ADLYALGCIF YEMLCGRPPF QEKGIGDLFA AHMFQPPAPP
SSIDPEIPPD LEAALLSLLA KEPEQRFPSA AALSKALERP GMDSTSRTRV ASGDSPPSER
MATAQPTTLG TSAASVAASS HIRQGVRWPW IAAASMALVT GLGVALAFTT NGEPAATSAA
STLPRDPPAA DKALTNDAAD PEESNRWVRI TPPTQRLILG ISAETAEATE DAIGLRPERQ
VEAPSATYEI QQHEVTWSEL EPWLSDNPEA IVYRPDWVPE APEARAELAA TGIPWDTAYS
YCRAIGARLP TEAEWEYAAR GSERRFYTWG PERLDIRRTN AYRGEDARIA QVMSGDQDRT
PGPTPDALYD MMGNAQEWVA DLWRNARPGD NESWVQTADA TFRTIRGLPL NQALPASLPR
EGAAYREALC ASLSCFEGSE QALAYQGFRC ARDAAR