Gene Hoch_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0558 
Symbol 
ID8542938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp752059 
End bp752964 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content67% 
IMG OID646385352 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003265089 
Protein GI262193880 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0932212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT ACGACGTCAT CATCGTGGGC GGAGGACCCG CCGGGCTCGC CGCCGCGCTA 
ACGCTCGGCC GTGCCTGTCG GCGCGTGCTG CTATGCGATG CCGGCTCGCC GCGCAACGCC
GCCGCAACTC ACATTCACAA TTTCGTCACC CGCGACGGCA CGCCGCCTGC CGAGTTCCGC
TTGATCGGAC GCGAGCAGCT TGCACCGTAC GCGAGCGTCG AGATTCAAAA CCTGCGCGTG
ACATCCATCG CCGGCGAGCG CGGCGGGTTT CGCGTGACGA GTTCTGCCGG CTCCGCGCGG
GCACGCCGCA TCATCCTGTG CACCGGCATG GTCGACGAAA TGCTCGATAT CCCCGGTTTC
CGCGATGGCT GGGGGCATTC CATCTTTCAG TGCCCGTACT GTCACGGATG GGAAGTGAGG
GGTCGCCGCT GGGGCTATCT GGCGCTCGAT ACCTTCGGCC TCGAGCACGG GTTTCCGGCG
CTGCTCAAGA ACTGGAGCGA CGATGTCGTG GTGTTCACCG CGATGGACAC GGATGTCCCC
GCCGAGCTCC TCGACGGGCT GCGGCAACGG GGGATCCGCT TCGAGGCCAG TCGGGTCGCC
AGGCTGGCGG TGGACGATCG CTCGTTGACG CATGTCGAGC TCGAGGACGG CACACGCGTG
CCGTGCGAGG TGCTCTACGC CCATCCGCCG CAGCGCCATG TCGAGTTCGT GCAGCGGCTC
GGGCTCACGC TCGACGAGCT CGGCTACGTG CAGGTCGATC CGCTCACGCG CCAGACCTCA
CGCCCCGGCG TCTACGCGGC TGGCGATCTC ACGACGCGGG CGCAAAGCGC GATCTTCGCC
GCGGCAGCCG GCGCGCAAGC GGCCGGGATG CTGAATCACG AACTCAGCAT GGAAGTCACG
CACTGA
 
Protein sequence
MSEYDVIIVG GGPAGLAAAL TLGRACRRVL LCDAGSPRNA AATHIHNFVT RDGTPPAEFR 
LIGREQLAPY ASVEIQNLRV TSIAGERGGF RVTSSAGSAR ARRIILCTGM VDEMLDIPGF
RDGWGHSIFQ CPYCHGWEVR GRRWGYLALD TFGLEHGFPA LLKNWSDDVV VFTAMDTDVP
AELLDGLRQR GIRFEASRVA RLAVDDRSLT HVELEDGTRV PCEVLYAHPP QRHVEFVQRL
GLTLDELGYV QVDPLTRQTS RPGVYAAGDL TTRAQSAIFA AAAGAQAAGM LNHELSMEVT
H