| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0489 |
|---|
| Symbol | |
|---|
| ID | 8542869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 664452 |
|---|
| End bp | 665096 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646385285 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_003265022 |
|---|
| Protein GI | 262193813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.597099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCG TCGATCTTCA ATTGGAAGAT AAGTCCGAGT GGGTGAAGGT CTTTGATCCG
CGCGACTGCA CCCTGTTCGT GCCGCTGGAC GAGCCGCCCG AACTCAACTC CACAGTGCGC
GTCGACCTGG TCCTGGGCGA TAGCGGGCCG CGCGTGTTGC TGCGCGGCAA GGTCATGCGA
CGCCAGGCCA AGGCCAACGC GACCTCGCCG GCCGGCTGCG TGATCGCGCT CGGTCCCAAG
GAGCAGGAGA AGATCAACTA CCTCAACGGC TACGTGCGCG GCGGCATGCT CGACCTGCGC
GAGAAGCGCC GCCTGCCGGT GCGGTTGCCG GTGACCTACG GCGGCATCGA CGGGCCGTGC
CGCAGCTTCA CGCGCGACAT CAACGAGGAG GGGGTGTTTG TGATCTCCGA GGATCCTCTG
CCGGAGGAGT CGCGCATCCA CATGCTGATC ACCGTGCCCG GACGCGACGA GCCGCTGTCG
CTACACGGCG AGGTCTCGCA CACGGTCCTC GCCGATGACG AGGACATCCC CGGCATGGGC
GTGGTCTTCG AGCAGCAAGA TCGCTCGGAT GAGTTGACCG GAATTATCGA CCGACTGGAA
AAGGCGTTTC TCTCTGGAAC GCTGCCGGAA TCGACCTTGC TTTAG
|
|---|
| Protein sequence | MLRVDLQLED KSEWVKVFDP RDCTLFVPLD EPPELNSTVR VDLVLGDSGP RVLLRGKVMR
RQAKANATSP AGCVIALGPK EQEKINYLNG YVRGGMLDLR EKRRLPVRLP VTYGGIDGPC
RSFTRDINEE GVFVISEDPL PEESRIHMLI TVPGRDEPLS LHGEVSHTVL ADDEDIPGMG
VVFEQQDRSD ELTGIIDRLE KAFLSGTLPE STLL
|
|---|
| |