Gene Hoch_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0483 
Symbol 
ID8542863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp657811 
End bp658917 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content66% 
IMG OID646385279 
Productoxidoreductase domain protein 
Protein accessionYP_003265016 
Protein GI262193807 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.264242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGG AACTGAAAGT GGCGCTCGTG GGCTGTGGCC AGATCGCCGA CGGCCACGTG 
AGCGAGATCC AAAAGCTCGG CAACGCCAAA GTCCTCGGCG TCTGCGACCT CGAGCCGCTG
ATGGCGGAGC AGCTCGCCGA GCGCTACGAC GTACCCCACC ACTACGCCGA TTACCACCAG
ATGCTGGAGA TGGTGCGGCC CGACGTGGTG CACATCTGCA CGCCGCCGGG CTCGCACCTG
GCGCTGACCA AGGCGGCCGT CGACGCCGGC GCGCACGTGT ACGTCGAGAA GCCGCTGGCC
CTCGATTACG ACCAGTCGGT CGAACTCGTG CAGTACGTGG AGAAGGCCGG TCGCAAGCTC
ACCATCGGCC ACAACAGCGA GTTCGATCCG CCCTCGCTCG AGATGCGCAA GCTGCTCGCC
CAGGGTGTGA TCGGACAGCC GGTCCACATC GAGAGCTGGT TCGGCTACAA CCTCGGCGGC
CCCTTCGGCA AGGTCATCCT GGGCTCGCCC GACCACTGGG TGCACCGCCT GCCGGGCAAG
CTGTTCCAGA ACAACATCAA CCACATGCTC AACAAGATCA CCGAGTTCAT CACCGATGAG
CGTCCGGAGG TCAAAGCCAT GGCGTGGCGG CGCGACACCT CGCAGAAGTT CGGCGACGTG
CGCGACGAGC TCATGGATGA GCTGCGCGTG ATCATCCGCG GCGAGAAGGT CTCGGCGTAC
GGCACCTTCA CCGCCGCGGT CAAACCGGTC GCGCACTTCT CGCGCGTCTA CGGCACCGAG
AGCATCGCGC ACCTCGACTT CATCTCGCGC ACGGTCACGG TCGACCGCGG CGCCACCCTG
CCGAGCGCCA TCGGACGCCT GGCCGCCGGC TTCTCGCAGG CCGCCGCGCA GGCCCGCTCG
GCCCTCGACA ACGCGCGCCG CTTCGCGGCC TCTGACTATC ACTTCTTCGC CGGCATGAAC
GAACTCATCC GGCGCTTCTA CGACAGCATC CTGAGCGACG CGCCGCTGCC CATCGCCACC
CGCGACATGC TGCGCATCGC CTGGATCATG GATGAGATCT TCGCCCAGAT CGGCAAGCCT
GGGCGCAGCC ACGGAGACGC GCCATGA
 
Protein sequence
MSTELKVALV GCGQIADGHV SEIQKLGNAK VLGVCDLEPL MAEQLAERYD VPHHYADYHQ 
MLEMVRPDVV HICTPPGSHL ALTKAAVDAG AHVYVEKPLA LDYDQSVELV QYVEKAGRKL
TIGHNSEFDP PSLEMRKLLA QGVIGQPVHI ESWFGYNLGG PFGKVILGSP DHWVHRLPGK
LFQNNINHML NKITEFITDE RPEVKAMAWR RDTSQKFGDV RDELMDELRV IIRGEKVSAY
GTFTAAVKPV AHFSRVYGTE SIAHLDFISR TVTVDRGATL PSAIGRLAAG FSQAAAQARS
ALDNARRFAA SDYHFFAGMN ELIRRFYDSI LSDAPLPIAT RDMLRIAWIM DEIFAQIGKP
GRSHGDAP