Gene Hoch_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0438 
Symbol 
ID8542818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp601474 
End bp602412 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content74% 
IMG OID646385235 
Producthypothetical protein 
Protein accessionYP_003264972 
Protein GI262193763 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.124542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTT CAGACAGTCA GTCCCCGGCG TCGAGTGCGG ACGAATCGGC GCCGGCCGGC 
GAGCGCGAGG TGGCGATCGC GGCCGTCGAC GGCGTGCCGC TGATGGCCAC GCTGTTTGCG
CCCGAGCCCG CAGGAGACGC CCGCGGGCGC GTGCTCGTGG GCGCGGCCAC GGGCGTCCGC
CGCGGCTACT ATCGCCGCTT TGCGCGCGCG CTGGCGGCCG CCGGCTTCGA GGTGATCAGC
TTCGATTACC GCGGCATCGG CGACTCGGCG CCGCCGCGTC TGCGCGGCTT CGAGGCCAGC
ATGGCCGACT GGGGCGCGCG CGACACCGAG GGCGTGCTGC GCTGGGCGCT GGCGCGATCG
GATGACGACG GGCTGCCGCT GAGCTACGTC GGCCACAGCG TCGGCGGCCA GGTGCTGCCG
CTGGCCGCGA GCGCCCAGGA GCTGGCCGCG GTGCTGCTGG TGGCCTCGTC CGCCGGACCG
CGCACCTGCT GGCCGCTGCC CGAGCGCCTG GTGCTGGCCG TGTTCTGGTG GCTGCTCGTG
CCGCTGTGTG TGCTGATTTT CGGACGCCTG CCCGGGCGCG CGATGCTGGC GGGCGAGGAT
TTGCCCGGGG GCGTGGCGCT GCAGTGGGCG CGCTGGGGAC GGCATCCCGA CTACCTGCTC
GGCGAGCTGC CCGAGGTGTT CGACAACGCG CAGCGCATCG CCGTGCCGGT GCGCGTGATC
AGCATCGATG ACGACCGCTA CGCGCCGCGC CCGGCCGTGG ACTCGCTGGC CGCCTGGTAC
GGACCCTACG GCGCCGAGCG CGTTCATGTC CAGCCGTCCG AGATCGGCGC CGAGCACATC
GGCCACTTCG GCTATTTTCG CGCCGAGCGC GAAGGCGATC TGTGGGCCGA CGCCATCGAG
TGGCTGAGTG AGGCCGGCCG GCGGCCGCGC GGCGAATAG
 
Protein sequence
MGSSDSQSPA SSADESAPAG EREVAIAAVD GVPLMATLFA PEPAGDARGR VLVGAATGVR 
RGYYRRFARA LAAAGFEVIS FDYRGIGDSA PPRLRGFEAS MADWGARDTE GVLRWALARS
DDDGLPLSYV GHSVGGQVLP LAASAQELAA VLLVASSAGP RTCWPLPERL VLAVFWWLLV
PLCVLIFGRL PGRAMLAGED LPGGVALQWA RWGRHPDYLL GELPEVFDNA QRIAVPVRVI
SIDDDRYAPR PAVDSLAAWY GPYGAERVHV QPSEIGAEHI GHFGYFRAER EGDLWADAIE
WLSEAGRRPR GE