| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0435 |
|---|
| Symbol | |
|---|
| ID | 8542815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 596927 |
|---|
| End bp | 598282 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646385232 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_003264969 |
|---|
| Protein GI | 262193760 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.139217 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCCCA TGTACCGCGC TTGGTTTCAG TGCTTCTCGG GTTGCGAGGG ACAGCTGCCG
CTCGACTCGG TGGTCTATCG CTGTCCGCAC TGCAACGGCT TGCTCGACAT CGTCCACGCG
CGCGAGCCGC TGCGCCGGCG CTCGGCAGCC GCCTGGATGC AGCTCTTCGA CAGCCGCGTG
ATGTCGACCC AATGGCCCTA CGGCTCGGGC GTGTGGGGCA AAAAGGAGTG GGTGGCCCCG
CACGTGGAGA GCGAGCACGT GGTGTCGATG TTCGAGGGCT CCACCAACTT GATGTGGACC
GGACGCTACG GCGAGAGCAT CGGCGTGCCC AACCTGTGGG TCAAGCAGTG CGGCAACTCG
CACACCGGTT CGTTCAAGGA CCTGGGCATG ACCGTGCTGG TGTCCACGGT CAAACAGATG
ATCGCCCAGG GCAAAAACAT CCCGGCCATC GCCTGCGCCT CCACCGGCGA CACCTCGGCG
TCGCTGGCCG CCTACGCGGC CGCCGCCGGC ATCCGCGCCG TGGTCATCCT GCCGCGCGGC
AAGATCACGA CCGCCCAGCT CGTGCAGCCG CTGTCCAGCG GCGCCCTGGT GCTGGCCATC
GACACCGACT TCGACGGCTG CATGCGCCTG GTCACCGAGC TGGCCGAGCG CGAGGGCGTG
TACCTGGCCA ACTCGATGAA CTCGCTGCGC CTCGAGGGCC AGAAGACCGT GGCCATCGAG
ATGGTGCAGC AGTTCAACTG GGAGGTGCCC GACTGGGTGG TCATCCCCGG CGGCAACCTG
GGCAACGTGT CGGCGCTGGG CGCGGGCTTC GAGATGATGC TCGAGCTGGG CCTGATCGCC
AAGCGGCCGC GCATCTGCGT CGCCCAGGCG GCCCACGCCA ACCCGCTGTA TCAGAGCTTT
CAGAGCAAGT TCGAGCAGTT CGAGCCGATG CAGGCCAAGC CCACGCTGGC CTCGGCGATT
CAGATCGGCA ACCCGGTCAG CTATCAGCGC GCGGTGCGCG CGCTCGAGCG CTTCGAGGGC
GTGGTCGAGC AGGCCACCGA GGCCGAGCTC GCCGACGCGG CCGCGCGCGC CGATCTCGCC
GGCATGTTCT GCTGCCCGCA CACCGGCGTG GCCCTGGCCG CGCTCGAGAA GCTGGTCGCC
CGCGGCGAGG TCACGCGCGA CGACCGCGTG GTCGTGGTGT CCACGGCCAA CGGCCTCAAG
TTCACGGACT TCAAGATCCA GTATCACGAG GACCAACTCG CCGACGTGCC CCAGCCGCGC
CACCGCAACG AGCCCATCCC GCTCGCCGAC GAGTACGAGG CCGTGCGCAG CGCGGTGCTG
CGCGATATCG AGGCCCGTCG CGACGCCTCC GCATGA
|
|---|
| Protein sequence | MGPMYRAWFQ CFSGCEGQLP LDSVVYRCPH CNGLLDIVHA REPLRRRSAA AWMQLFDSRV
MSTQWPYGSG VWGKKEWVAP HVESEHVVSM FEGSTNLMWT GRYGESIGVP NLWVKQCGNS
HTGSFKDLGM TVLVSTVKQM IAQGKNIPAI ACASTGDTSA SLAAYAAAAG IRAVVILPRG
KITTAQLVQP LSSGALVLAI DTDFDGCMRL VTELAEREGV YLANSMNSLR LEGQKTVAIE
MVQQFNWEVP DWVVIPGGNL GNVSALGAGF EMMLELGLIA KRPRICVAQA AHANPLYQSF
QSKFEQFEPM QAKPTLASAI QIGNPVSYQR AVRALERFEG VVEQATEAEL ADAAARADLA
GMFCCPHTGV ALAALEKLVA RGEVTRDDRV VVVSTANGLK FTDFKIQYHE DQLADVPQPR
HRNEPIPLAD EYEAVRSAVL RDIEARRDAS A
|
|---|
| |