Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0401 |
Symbol | |
ID | 8542781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 551950 |
End bp | 552594 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646385198 |
Product | hypothetical protein |
Protein accession | YP_003264935 |
Protein GI | 262193726 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0926387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCACCA TCTATCTCAT CGCATTGCTC ATCGGCGGCA GCCTCCTGTT GGTCTCGCTG TTCGCAGGCG GCGACGCTGA CGCTGACGCC GACGCCGACT TCGCGGGCGG CGATGTCGAC ATGGACATGG ACGCCGATAT CGACGTCGAT GCCGATCTCG ACGCCGACGG CGACCTGCAC GGCGGCGGCT TCGATTTCGG CCTGTGGTTG CCGATCGCGT CGCTGCGCTT CTGGACCTTC TTCGCGGCCT TTTTCGGCGT CACCGGCGTC GCCCTCACGC TCCTGGACGC GAGCTTGGGG CAGTGGCCGC TGCTGGCGAT CGCGGTCGCG ATGGGCTACG GCTGCGGCAC CGCGGCGGTG GCCGCGTTCC GCTACATGGA CCGCTCGCAG ACCTCGAGCA GCCTCTCGCT CCAGGATTAC ATCGGCGAGA GCGCGCTGGT GCGCGTGTCC GTAGGCCCGA ACAAGGTCGG CAAGGTTCGG CTCGAGGTCA AAGGCCGCAG CGTCGAGCTG ATGGCCAAGA CCGAGGAGAG CGATGCCTTT GCCGTGCGCG AGCGCGCCAT GGTCTACGCC GTGGACGACG ACGGCTACGC GCTCCTCACC CGTGTTGGAC AGGCGGACCA GAAAAAACTC ACGCGTACCG CCTGA
|
Protein sequence | MLTIYLIALL IGGSLLLVSL FAGGDADADA DADFAGGDVD MDMDADIDVD ADLDADGDLH GGGFDFGLWL PIASLRFWTF FAAFFGVTGV ALTLLDASLG QWPLLAIAVA MGYGCGTAAV AAFRYMDRSQ TSSSLSLQDY IGESALVRVS VGPNKVGKVR LEVKGRSVEL MAKTEESDAF AVRERAMVYA VDDDGYALLT RVGQADQKKL TRTA
|
| |