Gene Hoch_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0331 
Symbol 
ID8542711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp468573 
End bp469169 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content68% 
IMG OID646385128 
Productprotein of unknown function DUF179 
Protein accessionYP_003264865 
Protein GI262193656 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.502019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.568849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA CCGAACTGGC ACCCGGCCTG CTCTTGGCCA TGCCGCATCT GCTCGATCCC 
AACTTTCGCC GTTCGGTGGT GCTCATGGTC GAGCACGACG ACGAAGGCTC GTTTGGCCTG
GTCGTCAATC AGCCCACCGA GCTGTCCATG GACGAACTCT ACGAGTCGCT GGATCTGGCC
TGGAAGGGCA GCAGCGAGGC CATGGTGTGG CGTGGCGGCC CCGTGATGCC GACGCATCTG
TGGCTGGTGC ACGCGCCTCT GGCGGGGTCC TCGGACAGCG GGACGGAGTC CGCCCTGCTC
GGCCTGGGCG ATGGCGGCAC GGTCGCCGTC GGCCCCGAGC TGCGCGTCTC CGGCGCCATG
CCCGAGCTCA TCGAGATGTT CGGCAACGAG CCGCCCGCGC AGTTGCGCGT GCTGCTCGGC
TACGCCGGCT GGGGCGGCGG ACAGTTGGCC CAAGAAATGT CTCAGGGCGC GTGGCTGCAC
GTCGACGCCA CGCCCGAGCT GATCTTCGAG ACGCCGGCCG AGGAGATGTG GGAGCGCGCA
GTGCGCACCC TCGGGATCAA CCCCGAGACC ATCATCCACG GCGCCGGCAT CCACTGA
 
Protein sequence
MIETELAPGL LLAMPHLLDP NFRRSVVLMV EHDDEGSFGL VVNQPTELSM DELYESLDLA 
WKGSSEAMVW RGGPVMPTHL WLVHAPLAGS SDSGTESALL GLGDGGTVAV GPELRVSGAM
PELIEMFGNE PPAQLRVLLG YAGWGGGQLA QEMSQGAWLH VDATPELIFE TPAEEMWERA
VRTLGINPET IIHGAGIH