| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0326 |
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| Symbol | |
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| ID | 8542706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 463069 |
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| End bp | 464385 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 646385123 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003264860 |
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| Protein GI | 262193651 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.856716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAC CCGCCAGCAA CGCACCCCAA CCGTCTCGTT CGCCCTCTGG TTCGCTCGAC
CCCAAAGAGC GCCCGGTGGC CGCGGCCGCG GCTGTGCGAC GGCAGCGGCA GCGGCGCATG
CGGACCCTGG GCCGCTGGCT CAAGCGTGGG GTTCTGGCGC TCGTGGTCGT CGGCATCGGC
GCCAGCCTGG TCACGGCCTT TCTGCCCGAG CCCGTGAGCG TCGATCTGGT CGCGGCCACG
CGCGCGCCCA TGCGCGTTGT CGTACGTGAG GACGGAATCA CCCGCGTGGT CGAGCGCTAT
GTTATCTCGG CGCCGCTCGC CGGTGAACTC TTGCGCATCG AGCACGAGCC CGGCGACGCG
GTCGCGGCCG GCGATGTGCT CGCGCGCATC GTGCCGGCGC GTTCGCCGCT GCTCGACGCG
CGCTCGCGAG CCGGTGCCGA CGCCCGCCTG GGCGCCGCGC GGGCCGCCCG TCGCCAGGCC
GAAGCCCGGG CCGAGCGCGC GCTGGCCGCC AGCGAGAGCG CCGAGCGCGA GGCCCAGCGC
TACCGCGATC TCGGCGCGCG CGGCGCGGTC TCCGACGAGG CCCGCGAGCG CACCGAGGCC
GACGCTCGGA TGGCGGCCCA GGACCTGGCG GCCGCGCGCA TGGCGGTCGA GGTGGCCACG
CACGAGCTCG AGGCGGCGCG CGCGGCGCTG GGCCAGGACG AGGGCGCGGG CACCGGCGAG
GTGCTGGTGC GCGCGCCCGT GGCCGGACGC GTGCTGCTCG TGCACCAGGA GAGCGCGGCG
CGCGTCGAGC CGGGCCGCGC GCTGCTCGAG ATCGGTGACC CGGGCTCGCT CGAGATCGTC
GCCGACGTGC TCACGCGCGA CGCCGTGGCC ATCGCGCCTG GGGCCGAGGT GGCGGTCGAG
CGCTGGGGCG GTGAGAGCGC GCTGCGCGGC CGCGTCGAGC GCGTCGAGCC GTCGGCGTTC
ACGCGCGTGT CGGCGCTGGG CGTCGAGGAG CAGCGCGTGT ACGTGCTCAT CGCGCTCGAG
CCCGGGCAGG ACGCGGCGCT CGCGCTCGGC GACGGCTACC GGGTCGAGGT CGCGATCACC
GTGTGGCAGG CCGACGATGT GCTCAGCGTG CCGCTGGGCT CGGTGTTTCG CGACGGCGAG
CGCTGGGCCG TGTACGTCGA GCGCGACGGC GTGGCCGCGC TGGTGCCGGT CGAGCTGGGG
CGGCGCAACC GCGAGCGCGC CGAGATCCTC TCGGGCCTCG ACGCGGGCGC GCGCGTGATC
GCGCATCCCG GCGACCGCGT ATCCGAAAAC GTCGCCATCG TCGCCGCCGC GCACTGA
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| Protein sequence | MSEPASNAPQ PSRSPSGSLD PKERPVAAAA AVRRQRQRRM RTLGRWLKRG VLALVVVGIG
ASLVTAFLPE PVSVDLVAAT RAPMRVVVRE DGITRVVERY VISAPLAGEL LRIEHEPGDA
VAAGDVLARI VPARSPLLDA RSRAGADARL GAARAARRQA EARAERALAA SESAEREAQR
YRDLGARGAV SDEARERTEA DARMAAQDLA AARMAVEVAT HELEAARAAL GQDEGAGTGE
VLVRAPVAGR VLLVHQESAA RVEPGRALLE IGDPGSLEIV ADVLTRDAVA IAPGAEVAVE
RWGGESALRG RVERVEPSAF TRVSALGVEE QRVYVLIALE PGQDAALALG DGYRVEVAIT
VWQADDVLSV PLGSVFRDGE RWAVYVERDG VAALVPVELG RRNRERAEIL SGLDAGARVI
AHPGDRVSEN VAIVAAAH
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