| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0313 |
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| Symbol | |
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| ID | 8542692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 447557 |
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| End bp | 449050 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646385109 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_003264847 |
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| Protein GI | 262193638 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCA TGCCAAGTCA GCACACAGCA TTCGGCGCCG CGGCCACACT CGGCGCGCTT
CTGTTTTCTG GATGCGTACT GACCACGACC GATCGCAACC AGTGCCGAGA CAATCTCGAG
TGCCGCGACG CGTTTGGACT GGGCGCAACC TGCAACGCCG ATGGCTTTTG CGTCAGCGAG
GCAATCGACC CCCGCTGCAC AAAGACCTTC CCCGACGACC TCCTGGCCTC GGACGAGCGC
CGGCGTTTCT ACAAGGACTA CGTGGTCGTC GGCAGCATCA TGCAGCGCGA GGTCGCCCTG
TTCGAAAAAT TCGAGCTGTC GGCGGAGCTG GCCTTCTCGC GCGCCAACCA GAGCGGCGGC
GTCGATGGCC GCAGATTTGG CGTGGTGTAC TGCAGCGCCG ACGCGGGCTA TGACGACGGC
CTCGAGGCCG GTGGCGAGGC CGCGGCCGCG ATGGCCGGCT ACCTCGCCGA CACCATGTCG
GTGCCCGCGA TCTTCGGCCC GGCGACCTCG GCCGAGACCG AGTCGGCCTT CCTCGCGCTC
GAGGGCAAGA ACGTGCTGCT GGTGTCGCCC TCGGCGACCA GCCCCGACCT CACGCCCATC
GACAACCCCG AGCCCAGCGA CGAAAACCCC GGCCTGCTGT GGCGCACCGC CCCGCCCGAC
TCGTTCCAGG GCGAGGCCAT CGCGGTCGAT ATGCGGGCGC CGGGCGCCGG TCGCGAGGTC
GCCGTGGACA CGGTGGTCGT CATCCACATC GACGACACCT ACGGCAACGC GCTCTACCAG
GCCTTTGCCA GCAGCTTCGA GAGCCGCGGC GGCACCGCCA TCTCGCGCCC CTTCGTGCCC
AACAACGCCA GCCAGCCCGG CGCGCGCCTC GACGAGGTCG TGCCCCAGGT CGGCCTCGCC
GGCGGCTTCG ACGAGGTGCT GTTCATCTCC TCGAGCATCG ACGACATCGT CGGCTTCCTC
AACACCAGCG CCGAATTCGC CGGCTACGAC GGCAAAGGCA TCTTCCTGGC CGAGGCCGCG
GCCTCCGACG ACGTGCTCAA CGTCGCCGAC GCCACCCGCT TTCCCCAGGT CCGCGGCTCG
CGGCCGCGCG CCCGCGACCG CGACAGCGAC CTGGTCTACG CCAACTTCCT CTCGGCCTAC
TCGTTCGCGT ACAAAGAGGA CGCCGACGGC CAGGTGTTCA CGGCCAACTC CTACGACGCC
GGCTGGCTCA TCGCCTTTGG CGTGAGCTGG GCGCTGATCA ACGAGGGCAG CCTCGACGGC
ACCTCCATCG CCCGCGGTCT GCGCCGGCTC AGCAGCGGCC CCACGGTCAA CCTCGACGGC
GAGGGCTGGG CCACCATGCT CGAGTCCTTC GGCAACGGCG AGAGCATCAA CATCAACGGC
GCCTCGGGCT CGCTCGACTA CGACAACAGC ACCGAAGAGA CCGCGACCGA AGTCGAGATC
TGGACCATCA GCGCCGAGAA CGAGATCGAC GTGGTCGATC TCTTCGAGCC CTGA
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| Protein sequence | MSPMPSQHTA FGAAATLGAL LFSGCVLTTT DRNQCRDNLE CRDAFGLGAT CNADGFCVSE
AIDPRCTKTF PDDLLASDER RRFYKDYVVV GSIMQREVAL FEKFELSAEL AFSRANQSGG
VDGRRFGVVY CSADAGYDDG LEAGGEAAAA MAGYLADTMS VPAIFGPATS AETESAFLAL
EGKNVLLVSP SATSPDLTPI DNPEPSDENP GLLWRTAPPD SFQGEAIAVD MRAPGAGREV
AVDTVVVIHI DDTYGNALYQ AFASSFESRG GTAISRPFVP NNASQPGARL DEVVPQVGLA
GGFDEVLFIS SSIDDIVGFL NTSAEFAGYD GKGIFLAEAA ASDDVLNVAD ATRFPQVRGS
RPRARDRDSD LVYANFLSAY SFAYKEDADG QVFTANSYDA GWLIAFGVSW ALINEGSLDG
TSIARGLRRL SSGPTVNLDG EGWATMLESF GNGESINING ASGSLDYDNS TEETATEVEI
WTISAENEID VVDLFEP
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