Gene Hoch_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0306 
Symbol 
ID8542685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp440774 
End bp442012 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content76% 
IMG OID646385102 
Productglycosyl transferase group 1 
Protein accessionYP_003264840 
Protein GI262193631 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGA TCCCCGCCTC TGAGTCCGCG AACGCCACCG GCCTGCGCCT GGCCATCGCC 
ACCGACGTCA GGTTCCTGCG CGACTCCGAG GGGCGCATCC ACTGCCGCTC GGGCGGCACC
GCGTATCGCT TCTGGCAGCG CTACGCCATC GCCTTCGACG AGGTCCGCGT GCTGGCCCGC
GTGTTTCCCC GCGGCGCCGA CGACCCGCAG CAGCCGGCGC CGGTCGAGGG GCCGGGCGTG
AGCGTGCACG CGCTGCCCGG CTTCGATGGC CCGCGCGGCC TGGCCCGCGT CGCCCCCCGC
GTGCTGGCCA GCATCTGGCG CGGCCTGCGC GACACCGACG CGCTGGTCGT GCGCGCGCCC
GCCACCGTCG GCCTGATCGC CTCGCGCATC GCCCAGGGCC GCGGCCTGCC CCTGGGCGTC
GAGGTCGTCG GCGACCCCTG CGACACCTTC GGCCCCGGCG GCGTCGGCCG CGGCGCGGCG
CCGTTTTTCG GACAGGTGTT CATCCGCGAC CTGCGCTGGC AGTGCCGGCG CGCGGACGCG
CTCGCCTACG TCACCGCCAG CGCGCTGCAG CGCCGCTACC CCGCGCGGGC GGACGCCTTC
GCCACCCACT ACTCCAGCGT CGAACTCGAC ACCGACGCCA TCGCGCCAGC GCCGCGCACG
CACACGGCCG CCGTGCAGGC CCCGCATCTG GTCACCGTCG GCCAGCTCGA ACAGCCCTAC
AAGGGCACAG ACCTGCTCAT CGAAGCCGTG CGCGCGCTGC GCGAGCGCGG ACTCGACGCC
CGCCTCACCG TGGTCGGCGA CGGCCGCTTT CGCCGCGCGC TCGAGGCCCA CGCGCGCACG
CTCGGCGTCG CCGAGCACGT GCACTTCGCC GGCCTGGTGC CCGCGGGCGC CGCGGTGCGC
GCGATCCTCG ACACCGGCGA CCTGTTCGTC TTGCCGTCGC GCGCCGAGGG GCTGCCGCGC
GCGCTCATCG AGGCCATGGC GCGCGCGCTG CCCGCTATCG GCAGCCGCGT CGGCGGCATC
CCCGAGCTGT TGCCGGAGCG CGATCTGGTA CCGTCCGAAA ACCCGCGAGC GCTCGCCGAC
GCCATCGCGT ACGCGCTCGC CGATCCCGCG CGCCTCGACG CGATGTCGCG CGACAACTGG
GAGCGGGCGC GGCGCGATTA CCACACCGCC ATCCTCGAGA CCCGGCGGCG CGCGTTCTAT
ACCCATCTGA GCCGCGCCGC CGTGCGCGCT CGCCCCTGA
 
Protein sequence
MVAIPASESA NATGLRLAIA TDVRFLRDSE GRIHCRSGGT AYRFWQRYAI AFDEVRVLAR 
VFPRGADDPQ QPAPVEGPGV SVHALPGFDG PRGLARVAPR VLASIWRGLR DTDALVVRAP
ATVGLIASRI AQGRGLPLGV EVVGDPCDTF GPGGVGRGAA PFFGQVFIRD LRWQCRRADA
LAYVTASALQ RRYPARADAF ATHYSSVELD TDAIAPAPRT HTAAVQAPHL VTVGQLEQPY
KGTDLLIEAV RALRERGLDA RLTVVGDGRF RRALEAHART LGVAEHVHFA GLVPAGAAVR
AILDTGDLFV LPSRAEGLPR ALIEAMARAL PAIGSRVGGI PELLPERDLV PSENPRALAD
AIAYALADPA RLDAMSRDNW ERARRDYHTA ILETRRRAFY THLSRAAVRA RP