| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0249 |
|---|
| Symbol | |
|---|
| ID | 8542628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 370109 |
|---|
| End bp | 370741 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646385045 |
|---|
| Product | Fimbrial assembly family protein |
|---|
| Protein accession | YP_003264783 |
|---|
| Protein GI | 262193574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAA TCAACCTATC CCCACTGAGG CGGCCCAAGA CCAGCGGCGA AGGCGCGCGC
TTGGTGCTGC TCGCAGCGCT GCTGTGGATC GGCACGCTGC TGGTCATCGT GTTCGTCGTG
CATCTGCCGA TGACCGATGA AATGGACACG CTCAACAGCG CGGTCGCCTC GCTCTCGGCG
GATAACGCCG ACAAGCGCAA CGAGCTCAAG GGCTACGAAG AGCTCAAGAG CACGCTGGCC
GACGCCGAGG CTCGCGCCGC CGTGGTCGAG CGTCTCAACG AGGCCCGCGC GGTGCCCGCG
CACATGCTCT ACGAGCTGTC GCGCATCCTC ACGCCGGGCC GTCTGCCGAC GACCACCGAG
GAGGTGGCCA AGCAGATCGA GGAGGGCCGC TTCCGCGAGA TGGTGCGCGA GTGGGATCCC
GCGCAGGTGT GGATCGAGCG CTTCAGCGAG GACGAGGAAG GCAGCTTCAA GCTCGAGGGC
AAAGCCCAAT CCGACAGCGA CATGACGCAG CTCGCGCTGC GCCTGCAAGC GTCCGTGTAC
TTCTACGAGG TCGTGCCGGT CGGCGGCAAC GAGGTCGAGG AGGACGGCGC CGTGTTTTAC
AAGTTCACGA TCACGGGAAA GGTGGCGTAC TGA
|
|---|
| Protein sequence | MIKINLSPLR RPKTSGEGAR LVLLAALLWI GTLLVIVFVV HLPMTDEMDT LNSAVASLSA
DNADKRNELK GYEELKSTLA DAEARAAVVE RLNEARAVPA HMLYELSRIL TPGRLPTTTE
EVAKQIEEGR FREMVREWDP AQVWIERFSE DEEGSFKLEG KAQSDSDMTQ LALRLQASVY
FYEVVPVGGN EVEEDGAVFY KFTITGKVAY
|
|---|
| |