| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0225 |
|---|
| Symbol | |
|---|
| ID | 8542604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 332987 |
|---|
| End bp | 334132 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646385021 |
|---|
| Product | Tryptophan 2,3-dioxygenase |
|---|
| Protein accession | YP_003264759 |
|---|
| Protein GI | 262193550 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG ATGTGACGAC ATACTGGGAC TACATCAAGG TCGAAGAGCT GCTCGGGTTG
CAGACCGGGC TCGGCGACGA CGAGGGCACC CTCAGCAACG ATGAGGTGAT GTTCATCGTG
GTCCACCAGA TCGACGAATT GTGGTTCAAG CTCACCCTGC GCGAGCTGGC CAGCGTGCGC
GCGCTCTTCG CCCAGGAGCA CGTGCGCGAG CAGTCGCTGT CCTCGGCCGT GCGCGGCATC
CGGCGGGCGG CGCTGCTGTT CGAGCAGACC GCCGGGCACT TCGCGCTGAT GGAGACGATG
ACCACGCGCG ACTACCTGGC GTTCCGCGAC AAGCTGAGCC CGGCGAGCGG GTTTCAGTCG
GCCCAGATGC GCGAGATCGA GATCCTGCTG GGGCTGCCCG AGAACGAGCG GATGGCGCTC
GGCCACGAGA CCTATATGCA GGCGCTGCGC GACCCCGATG GCGGCGAAAC CGCGGCCTCG
CTGCGGGTGC AGGCGCGCCA GCGCGATACG CCGACGGTGC GCGCGGCCAT CGAAGAGTGG
CTGTACCGCA CGCCCATCGA CGGCTTCACG CCCGACAGCG AGGGCGACGC CGAGGCCGTG
GCCGCGTTCA TCGACTCGTA CCTGGAGGCG CATCGCCGCG AGCTGGCCGG CATTCAGGCG
CGGGCCGTGG CCAGCGCGCT CACCGAGGCC GACCGCACGC GCCTGGGCGA GCGCTACGAG
CGCGAGCTGG CCTCGGCGCG GGCCTGGCTC GAGGGCCGCG ATGTGAGCGC GGCGCACGAC
GACAGCGAGG GCACGATCGA GCGCACGCGG GCGCGGCGCT CGCGCATCCG GGCCGCGCTG
GTGTTCATCG AGAGCTACCG CGAGCTGCCG CTGCTGGCGT GGCCGCGCGA GGTGCTCGAC
GCCATCGTGG CGCTGGAGCA GGCGTTCACG ATCTTCCGCC AGCGCCACGC GCGCATGGTC
GAGCGCGTGA TCGGCCGGCG CACCGGCACC GGCGGCTCGG CCGGGGTCGA TTATCTTGAC
CGCACGGCGC TCACCTACCG CGTGTTTCGC GATATCTGGG CCACGCGGAC GGTGCTCTTG
CGCGAGAGCG CGCTGCCGCC GCTGGTGCAC GCCGACTACT ACGGCTTCGC CGGCAGCGGC
GCGTGA
|
|---|
| Protein sequence | MTRDVTTYWD YIKVEELLGL QTGLGDDEGT LSNDEVMFIV VHQIDELWFK LTLRELASVR
ALFAQEHVRE QSLSSAVRGI RRAALLFEQT AGHFALMETM TTRDYLAFRD KLSPASGFQS
AQMREIEILL GLPENERMAL GHETYMQALR DPDGGETAAS LRVQARQRDT PTVRAAIEEW
LYRTPIDGFT PDSEGDAEAV AAFIDSYLEA HRRELAGIQA RAVASALTEA DRTRLGERYE
RELASARAWL EGRDVSAAHD DSEGTIERTR ARRSRIRAAL VFIESYRELP LLAWPREVLD
AIVALEQAFT IFRQRHARMV ERVIGRRTGT GGSAGVDYLD RTALTYRVFR DIWATRTVLL
RESALPPLVH ADYYGFAGSG A
|
|---|
| |