| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0215 |
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| Symbol | |
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| ID | 8542594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 315978 |
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| End bp | 318467 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646385011 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_003264749 |
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| Protein GI | 262193540 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTACA AGCACATCAA ATCGAATCTT CCGAGCCTCG CAGCCGCGCT CGGGGTGAGC
TTCGCGTTCG CGGCGCACGC ACAGGCGCAG GTCATCACGC CCACCTGCGA GACGCCCACC
GAGACCGTCG TGTACAGCGG CGCCTCCCTC GATGGCGCCA TGTCGCTCAA AGACAACGTC
ACCTTCACGG CCGGCAACCT GGTATTTGCC GCTGGCGGCG GCAGCGTCCG CTCCGAGGTC
GTCGACCTCG CGACCACCAC GCCGGCCATC GACACCACCG AGGCCGTGAT CACGGGTGCC
CGCATCATGT TCACGCCGAC GCCGCCGGTC GACGCCGCCG TGTACATGAG CACCTCGAAG
GCCGTGCCTT TCTTCGAGGC CAACGGACAG TGGGTCGAGG CCTATCGCTG CGATGGCACC
GCGACCGACT CCGAATTCTG CGTGCGCTTC CCGGCCGGCG ACGGCCGCGA CCTGCGCTGG
CGCCTGGAGA TGGCCGGCGC ATCGATCTCG AGCGTGCAGC TCCGTTTCGA CCACGTGGCC
GACAACGAGA ACTTCCGCGG CGGCGTGACG GTTTCCGACG GCGTGTCCTA TTTCGGCGGG
TTCAGCGAGC CGGGCGATCT CGGCCAGATG CACGCGTTGC CGGCCGACTT CGCGGTCACC
GATATCTACT GGGAGGGCCG CGACAAGCTG CAGATCGACG GCAACCGCGA CATCTACACC
GCCTCGCCCG ACGGCACACA GCGCCTGGAT TTCGTCACCG GCAACTACGA TCCGCTGATG
TACGACATCT TCAAGTTCAG CGACCTCGGT GTCCCGGTCG CGCAGTACGA CGCGATGATC
GACATGGTGG TCGACTGGTA CCGAAACGCC CTGCGCTTCG GCAATGCCTT CGACGCCGAC
CCGCCCGCGG CCGATCCCGG TCGTCGCTTT GGCGCGGTGG TCAACTCGAC TCCGGCCGTG
GTCGGCCGTC CCAAGCTGCC GACCTGGTTC GCGCGCGCGC CCTCGGCGCA GCGCCTGCTC
TTCAACACCT ATCAGATCAA CAAGCGCACG CGTCCGCCCC TGGTCATCTA CGGCGCCAAG
GACGGCATGG TTCACGCGGT GTACAGCAAC GCCGTCGATA TCGCCAATTC GGCCAACGGT
ACCGAAGCGT GGGCCTTTGT CCCGCCCTCG GTCGCGTCGA ACTTTCTGGT AGACGCGCTC
AACTCGCAGG ATTATCCCGC GCTCTCGCCC ATGGTCACCG CGTACCCGGA CACCTCGCCC
ATCATCGAGG AAGTGGTACT TGCGACCGGC GAGTTTGCGA CCATCGCCAT CCTCCCCGAC
GGCAGCGGCG GCAGCGGCGT ATCGGTCCTC GACATCACCA ATTCGGTCAT CGACACACCC
TTCACCTCGA ACGGCCCCAC GCCGCTCTGG CAGTGGTATC CGGGCGGCAC CGAGGCCGGC
CTGGCCACCA ATCAACCGGC GGTCGCGCGC GTGCGTATTA CCGGCGACCC CGATGATCAC
TATTTCATCA TCACCGGCAC CGGCAGCGCG TACGACGACC CCACGCATCA GAAGGGCCGC
GACGTCGTCG CATACGACCT CGAGACTGGC GCCGTGCGCT GGAGTTTCCG CATGCAGTGC
TCGCTGAGCA CCGATATCAC CGTATTTGAA ACCGATGACG GGGGCGAGCC CGTCGGTACG
GATGGCCAGC CGCCCATCAT CGACGGCTAC ATCGATCGCG CGATCTTCGG CGACCGCTGC
GGCAATATCT ATAAAGTCGA TGTCACCGAG GTGATCGACA ACAGCGCTGC GCCCACCGGC
ATCGGCACCC GGCCGCTGAT TGTGGACGGC CTGACGGTAA ACGCCTACTT CCAGACCTAC
ACCTCCCCCG CTACCGAGGG ACCGCCGGTC ACCGGCAACT TCGGCGTGCG CGCGCTCGAC
GATGGCACAT CGACCCGCGT GGTGCTGTTC TTCGGCACCG GCGGCATCGA GGACGAGCCC
GCGCTGTCGA CCTCGCCGCG CAACAAGTTC TATGCGCTGT TCGCGGCGCC CGCGTCGCTG
GGTAACGACG CCGAGCTCAT CGACAGCTTC GACGCCGTGT GCGAACTCGG TAGCTGCGAG
AAGTTCTACG GCGGCGTGAT CGTCAGCAGC GACCAGGTCA TCTATTCGCG CGTGCTCGAG
CCGGTTCCCG GCAATGTCGA CTGCGAAACC GGACGCACGG TCGTCGAAGC GCGCAACATC
ACCGGAACCC TCGACAGCTC GCTCTTCGAC AGCGGGGTGA GCTTCAGCGA GACCATCGAC
GGCGTCGCCA CCGGGCCGCT GAGCGGCCAC GGCAACGCGA TCTATATCCT CGACGCCCGC
GGTCGCGCCA CCGTGGTCGG CGATCCGCGC GCCGGCGAGG CCGGCGGAGA CACCGCGAAC
GGCACCGGCA ACGGCCTGGG TGGCGACGCG CGCTCGGCCG CGCTGATCAA CGCGCCGATG
CGCATCCTCG GCTGGCGGCA GGTGTACTGA
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| Protein sequence | MMYKHIKSNL PSLAAALGVS FAFAAHAQAQ VITPTCETPT ETVVYSGASL DGAMSLKDNV
TFTAGNLVFA AGGGSVRSEV VDLATTTPAI DTTEAVITGA RIMFTPTPPV DAAVYMSTSK
AVPFFEANGQ WVEAYRCDGT ATDSEFCVRF PAGDGRDLRW RLEMAGASIS SVQLRFDHVA
DNENFRGGVT VSDGVSYFGG FSEPGDLGQM HALPADFAVT DIYWEGRDKL QIDGNRDIYT
ASPDGTQRLD FVTGNYDPLM YDIFKFSDLG VPVAQYDAMI DMVVDWYRNA LRFGNAFDAD
PPAADPGRRF GAVVNSTPAV VGRPKLPTWF ARAPSAQRLL FNTYQINKRT RPPLVIYGAK
DGMVHAVYSN AVDIANSANG TEAWAFVPPS VASNFLVDAL NSQDYPALSP MVTAYPDTSP
IIEEVVLATG EFATIAILPD GSGGSGVSVL DITNSVIDTP FTSNGPTPLW QWYPGGTEAG
LATNQPAVAR VRITGDPDDH YFIITGTGSA YDDPTHQKGR DVVAYDLETG AVRWSFRMQC
SLSTDITVFE TDDGGEPVGT DGQPPIIDGY IDRAIFGDRC GNIYKVDVTE VIDNSAAPTG
IGTRPLIVDG LTVNAYFQTY TSPATEGPPV TGNFGVRALD DGTSTRVVLF FGTGGIEDEP
ALSTSPRNKF YALFAAPASL GNDAELIDSF DAVCELGSCE KFYGGVIVSS DQVIYSRVLE
PVPGNVDCET GRTVVEARNI TGTLDSSLFD SGVSFSETID GVATGPLSGH GNAIYILDAR
GRATVVGDPR AGEAGGDTAN GTGNGLGGDA RSAALINAPM RILGWRQVY
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