| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0113 |
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| Symbol | |
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| ID | 8542488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 177749 |
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| End bp | 179047 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646384905 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_003264647 |
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| Protein GI | 262193438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.397659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAGCA AGATGACGAT CATTGACGAA CTAGAAACCC GCCACCTGTT GCAGGACGTC
TCGCACCGCG AGGAGCTCGG CGAGTTGCTG CAGGGCGAGG CCATCTCCGT GTACGCGGGC
TATGACCCGA CGGCGACCAG CTTGCACGTC GGCAACCTGA TTCCGACCAT CATCCTCGCG
CGCCTGCAGC GCATCGGCTG TCGCCCCATC GCCCTGGTCG GCGGCGCCAC CGGCATGATC
GGCGACCCGA CCGGCAAGAG CGACGAGCGC AACCTGCTCG ACGAAGACAC CTTGCAGGCC
AACGTAGCCG CCATCCGCGC GCAGCTCGGA CGCTTCTTCG ACTTCGACGA CAGCGCCACC
GGAGCCAAGC TGGTCAACAA CCTCGACTGG TTTCGCGACA TCGGCTTCAT TCCCTTTCTG
CGCGACATCG GCAAGCTGCT CACGGTCAAT TACATGACCG CCAAAGACTC GGTGCGCAGT
CGCCTCGAGG ATCGCGCCAC CGGAATCAGC TACACCGAGT TCTCGTACAT GCTGCTGCAG
GCCTACGATT TCGTCCACCT GGCCAAAGAA CACGGCTGCC GGCTGCAGGT CGGCGGTTCT
GACCAGTGGG GCAACATCAC GGCCGGCATC GAATTGCAGC GCAAGCTCGG ACGCGAGTCC
GTGTATGGAC TCACCGGCCC GCTGCTGCTC GATTCCTCGG GCGAGAAGAT GGGCAAGACC
GCCTCGGGCA TGCGCATCTG GCTCGACCCC GAGCGGACCT CGCCCTACGC GTTCTACCAG
TACTGGCTCA ACACGCCCGA CGACGATGTC GCGCGCCTGC TGCGCGTGTT CTCCTGGCGC
TCGCTCGATG AGATCGACGA GCTCGTGCGC GCTCACGGCG AAGCGCCGCA GAAACGCCTG
GGGCAGAGCG CGCTGGCCGA GGACCTCACC GACTGGGTCC ATGGTGAAGA AGCCAAGCGC
AATGCCTTGG CCGCGAGTCA GGTCATGTTC GGCGGCAGCC TCGAGAACCT GAATGATGCG
GCCTTGCAGC CGCTCACGGC CGACCTGCCC ACGACCTCGC TGCCGCGGCA GCAGCTCGAG
TCGGGCATAC CCCTGCTCGA GCTCTTGGCG CAGACCAAGC TGGCCGCATC GAAAGGCGCG
GCGCGGCGGC TCGTCCAGGG CGGTGGCGTT TACGTCAACA ATATCCGCGT AGCAGACGTG
AACAAGACCC TACTGCCGGA AGACCTCGGC ACCGAGACCA TCATGATCTT GCGCGCGGGC
AAAAAGAACT ACCACCTCGT ACAGTTCCCG AACGCCTGA
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| Protein sequence | MSSKMTIIDE LETRHLLQDV SHREELGELL QGEAISVYAG YDPTATSLHV GNLIPTIILA
RLQRIGCRPI ALVGGATGMI GDPTGKSDER NLLDEDTLQA NVAAIRAQLG RFFDFDDSAT
GAKLVNNLDW FRDIGFIPFL RDIGKLLTVN YMTAKDSVRS RLEDRATGIS YTEFSYMLLQ
AYDFVHLAKE HGCRLQVGGS DQWGNITAGI ELQRKLGRES VYGLTGPLLL DSSGEKMGKT
ASGMRIWLDP ERTSPYAFYQ YWLNTPDDDV ARLLRVFSWR SLDEIDELVR AHGEAPQKRL
GQSALAEDLT DWVHGEEAKR NALAASQVMF GGSLENLNDA ALQPLTADLP TTSLPRQQLE
SGIPLLELLA QTKLAASKGA ARRLVQGGGV YVNNIRVADV NKTLLPEDLG TETIMILRAG
KKNYHLVQFP NA
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