| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0038 |
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| Symbol | |
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| ID | 8542408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 67184 |
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| End bp | 69268 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646384826 |
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| Product | transmembrane sensor domain-like protein |
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| Protein accession | YP_003264573 |
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| Protein GI | 262193364 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTAC TCGCGGCGGT GCTCGCGTTG ATCTGGCTCA TGGGGCGCGC AGGTCTGCTC
GATATCGGCG ATCGCTATCT GCGCTCGCTG TACTACGCAT TGAGCGAGAC CGATACGGTG
AGCGATGAGG TCGTGTTCGT CGCCATGGAC GAACACACGG GCGCGGCCTG GGGCCCGCCG
CCGTGGTCGT GGCAGCGCTA CGAGGACATG CTCGCCGCCA TCATCGAGGC CCAGCCGCGC
GCCGTGGCGC TGCTCGAACC GGGCCCGCGT GTGGCCCCCG GTGAGCCGCC CAATTTCGGT
CCCTTGGTCG CCAACGCGAT CGGCGCCGGA CGCATCGTGT TGCCGCCGCC GAACGCCGGC
CTGGGGCAGC CGAGCTTGGT GCTCGACGAG GCCCACGGTA TCGAGGCGGT CGAGCTCGGC
CTCGCGGACG ACAGTCTGCG ACCGGGCGTG ACCCGGATGC TCATCCGCGC GGCCACGCTG
CCGATGCCGC CGGGCGATAC CCTGTGGGTG CACTACCTCG GCGGGCCGCG CTCGCTGCCG
ACCGTGCCCG CGCACCGCAT CGCCACCGGC GAGATTCCCG GCAACACCTT CGAGGATCGC
ATCGTCGTCA TCGGCCTGCG CGGCGAGCGC TTTGCGCCCC AGGTGCCGAC CCCGGTGGGC
GCGCTGTCGC CGGCCGAGGT CCACGCCCAC GCCATCCGCG GCCTGGCCCG CGACTCGGTG
TGGCTGCCGC TGCCGACCTG GGCGCGCTGG CTGCTGTCGG CCTCGCTCGG ACTGTTCAGC
CTGCTGTTGG TGCCGCGCCT GGGCCTGCGG CGTTCGATGG GCCTGGTCGG CGCCGTCATG
CTGTTGCTCG TGGTGCTCGA CTACACCATG TTCGCGCTCG GCCTGCTGCG CGTGGGTGCG
ACCGCGCCGA TGCTCGTGGT CGGCTTCGCC GCGGGTGCGA GCTGGCTCGG CGAACGCCGC
ATGGTCCTGG TCGAGCTCGA GCTGATGTCG CGCTGGAGCG CGCGCCGGCT GGCGCTGGAG
AACACCGACC AGGAGCGCGC CGGGTTCGTC GAGCGCTGGG ATCGCTTCGC GCACACCAGC
CGCACCTTTG CCAAATTCGA GAGCACGCTG CTCGGCGAGC TCTCCGAGAA CAACTGGCAC
CTCGACTTCG CGCTGGCGCT CGGCGTCGAA CCCGAGCGCA TCCAGGAGAT GCGCCGCGAC
GTGCGCCGCG AGCCGTACAA GAGCGCGATC ATGATGCACC GGCCGATCTG GAGCGATCGC
TTCATGGACA CCGAGCTGCA GCAGAAATCG CTGCTGGTGC CGCTCAGCTC GTTCAACCGC
GTGCTCGGCC TGTGGGTGGT CAACTTCCGC AAAGGCGTCG AGGTGCCCAA CGACACCCTC
GACATGCTCA AGCTGTTCGC CGAGCAGCTG GCGCTCAGCA TGGAGCGCCA GCGCATCCAG
CGCCTGCGTC ACGAGCGCGC CGCGGTGCGC GAGAGCCTGC TTCTGCGGCC GCTGCAGGAG
GTGCGCAACA CGCTGCAGTT TTTGGCGCAC GAGCAGAGCA GCATGTCCAA GACCTTCGAG
TCGCTGCCGG TCGGCATCCT GGTGGCCACG CTGTGGGGCG AGGTCAGCTA CATCAACGCC
ACCATGCGCC ACTTCCTCGG CGCGCTGCAC GTCGATAACG CCAAGGCCAC CAGCCTGCCC
GATCTGCTGG CCGCGGTCAC CGGCTCCTCG GACGAGGAGA TCCAGGCCAC GGTGTCGCGA
TTGTTTGCCG GCCGGCCCTA CGTCGAGCTC AACTGCAAGA CCGACTCCGC GCTCGGCTCC
TCGTTTCAGC TCACGCTCTC GGCGCTATCC GAGACGCCGC TGCTCACCGA ACTCGATGCC
GCTCCCGAGG CCGCCATCGA GGACCCCGGC AGCGCCGACG CCGCCCAGGG CAAGGCCGCC
GACGAGCAGC CGGCGCCCAG CGCTGCGCCG CGCGGAGACG CGGCCGCGCT GTCGCACGTG
GTCCTCACCG TGACCCGACG CGCCCGCGCC GACGCCACCC GCAGCGACGC CGACGCCGAC
GCCGACAATC ACGCCGTGCG TCACAGCGCG ATCTCGGGAC GCTGA
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| Protein sequence | MFVLAAVLAL IWLMGRAGLL DIGDRYLRSL YYALSETDTV SDEVVFVAMD EHTGAAWGPP
PWSWQRYEDM LAAIIEAQPR AVALLEPGPR VAPGEPPNFG PLVANAIGAG RIVLPPPNAG
LGQPSLVLDE AHGIEAVELG LADDSLRPGV TRMLIRAATL PMPPGDTLWV HYLGGPRSLP
TVPAHRIATG EIPGNTFEDR IVVIGLRGER FAPQVPTPVG ALSPAEVHAH AIRGLARDSV
WLPLPTWARW LLSASLGLFS LLLVPRLGLR RSMGLVGAVM LLLVVLDYTM FALGLLRVGA
TAPMLVVGFA AGASWLGERR MVLVELELMS RWSARRLALE NTDQERAGFV ERWDRFAHTS
RTFAKFESTL LGELSENNWH LDFALALGVE PERIQEMRRD VRREPYKSAI MMHRPIWSDR
FMDTELQQKS LLVPLSSFNR VLGLWVVNFR KGVEVPNDTL DMLKLFAEQL ALSMERQRIQ
RLRHERAAVR ESLLLRPLQE VRNTLQFLAH EQSSMSKTFE SLPVGILVAT LWGEVSYINA
TMRHFLGALH VDNAKATSLP DLLAAVTGSS DEEIQATVSR LFAGRPYVEL NCKTDSALGS
SFQLTLSALS ETPLLTELDA APEAAIEDPG SADAAQGKAA DEQPAPSAAP RGDAAALSHV
VLTVTRRARA DATRSDADAD ADNHAVRHSA ISGR
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