| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2261 |
|---|
| Symbol | |
|---|
| ID | 8535425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2431735 |
|---|
| End bp | 2432583 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646384640 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_003264122 |
|---|
| Protein GI | 261856839 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT CACACACGAT TTTACGCTCA TCTGTGTTGG CTATCGCTAT AACATTGGCT
TTAGGCTCAT TAACAGGGGT GGCGAATGCC GAAGATACCG TAACCCAAAA TATGACCGAT
GTTCGCCAAG AAACCCAAAT TTGGACAACC TATGCGTTAA GCCCGTATTT AAGGGCTAAC
GATTTACGCG TATCCGTTCA AAATGGCAAA GCCACATTAA CCGGTACGGT GGATGACGGC
GTAACCAAAG ACCTCGCCAC GCAAATTGCA CTCGGGGTTG ATGGCATTAA AGATGTCGAT
AACCAAATTG TAGTGAATGC CGATTTTGTG CCTCCGGCTC AGTCTACAAC CCGCAGCTAT
GGCGAGGCTA TTGATGATGC CTCCATCACA GCGGCGATTA AAGCCAAATT ATTATGGAGC
AAATATGCCA GCGGTTTGAC CACGAGTGTT GAAACCAAGG CGGGTAGGGT GACCCTAAGC
GGCACAGCAA CCAGCAAACA GGCGAAAGAG GCCGCGCAAA ACTTGGCCAT GAATACGCAG
GGCGTGCTGT CGGTTAATAA TCAAATCAAG GTTGAAGCGC CCAAGCCGTC GCTGGGCGAC
AAAGCCAAAA GCGCGTTGAG CGATGCAGGC ACCGCAATTT CGGATGCGTG GATTACAACC
AAAGTAAACT CCACTTTTTT ATATTCCAGC AATGTGCACA GCGGTGCTAT TTCGGTTGCT
ACTAAAGATG GCGTAGTAAA ACTCACCGGC AAAACACAAA CGGGAGCCGA ACGCGCATTG
GCCATTGAAC TCGCCCAAAA CGTGCAAGGC GTTAAACGGG TAGACGCCAA GGCGCTGACC
CACAATTAA
|
|---|
| Protein sequence | MIKSHTILRS SVLAIAITLA LGSLTGVANA EDTVTQNMTD VRQETQIWTT YALSPYLRAN
DLRVSVQNGK ATLTGTVDDG VTKDLATQIA LGVDGIKDVD NQIVVNADFV PPAQSTTRSY
GEAIDDASIT AAIKAKLLWS KYASGLTTSV ETKAGRVTLS GTATSKQAKE AAQNLAMNTQ
GVLSVNNQIK VEAPKPSLGD KAKSALSDAG TAISDAWITT KVNSTFLYSS NVHSGAISVA
TKDGVVKLTG KTQTGAERAL AIELAQNVQG VKRVDAKALT HN
|
|---|
| |