| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2224 |
|---|
| Symbol | |
|---|
| ID | 8535388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 2396208 |
|---|
| End bp | 2396753 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646384604 |
|---|
| Product | protein of unknown function DUF1415 |
|---|
| Protein accession | YP_003264086 |
|---|
| Protein GI | 261856803 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.804791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATCACG AACCTTATAT CGCTCCTGTC CGTCAATGGG TTGAGCAGCT CGTCATCGGC
TACAACCTCT GCCCCTTTGC CAAGCGCGAA CTCGTCCGCG ATCGTGTTCG CTTCTTCGTG
AGCCAGGCGC AGGATGAAGA GCAACTGCTC GTCGATCTGG AAAACGAACT GACCTTGCTG
AGCGCGGATG AAGGTATTGA AACCACCTTG CTCATCACTC CGCAGGTTTT GCAGGATTTT
TTCGATTTCA ACCAGTTTCT GGGTCGAGCC GATCAGCGCG TGGCGCAATT AAAACTCAAG
GGCGTGTTTC AGCTCGCGAG CTTCCACCCC GATTACCAGT TTGGCGGCAC CGAGCTTGAG
GATGCCGAAA ACTACAGCAA TAAATCGCCT TACCCTGTAC TGCATCTATT GCGAGAAGCG
AGCCTGGATG AGGCGATCGA GAACTACCCA GACGCCGAAT CCATCCCCGA GCGCAATATC
GAGCAGCTAA AGCTGATGGG TTCGGATCGA TTGCGACGGC TGCTGGAAGA TTGTTTTAGC
CGGTAA
|
|---|
| Protein sequence | MNHEPYIAPV RQWVEQLVIG YNLCPFAKRE LVRDRVRFFV SQAQDEEQLL VDLENELTLL
SADEGIETTL LITPQVLQDF FDFNQFLGRA DQRVAQLKLK GVFQLASFHP DYQFGGTELE
DAENYSNKSP YPVLHLLREA SLDEAIENYP DAESIPERNI EQLKLMGSDR LRRLLEDCFS
R
|
|---|
| |