| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2176 |
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| Symbol | |
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| ID | 8535340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2338430 |
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| End bp | 2339722 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384557 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003264039 |
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| Protein GI | 261856756 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAT TGCCCTACGA CCATCTGACC CGAAGCGCCG ACCAAACCTT ATGCTTGGAA
GGATGCGCGC TCGACCAAAT AGCAGCCGAA TTTGGTACGC CGACCTACGT GTATTCTCGC
TCGGCCATTG AGCGGGCCTA CACCGAACTG ACGACCGCGT TCGGTGATCG TCCGCACCGG
ATTTGCTATG CCGTGAAGGC GAATAGCAAT CTGGCTATTC TCGCCTTGCT GGCGCGGTTG
GGCGCGGGTT TCGATATTGT GTCTGGCGGG GAATTGGCAC GGGTGCTCAA AGCAGGCGGC
GCTGCTGAGA AAATCGTATT TTCCGGCGTC GGCAAAACCC GCGATGAAAT CGAGCAAGCA
TTGCGCGCGG GCGTGGGCTG CTTGAATGTC GAATCCGAGG CTGAGTTGGC GCGCATCAGT
GAGGTGGCAG CCGGGCTCGG TGTCGTCGCC CCTATTTCGT TGCGGGTGAA TCCGGATGTG
GACGCCAAGA CGCATCCGTA TATTTCGACT GGTCTTAAAG ATAATAAATT CGGCGTGCCC
ATCGAGCAGG CCCCCGCTTT GTATCGACAT ATCGCGCGCG ATGCGAATCT CAAAGCGGTC
GGGATCGATT GCCATATCGG TTCGCAGATC ACCGATGTGT CGCCGTTCGC CGATGCGGCC
AGGCGCGTGC TTGCCCTGCT CGATACGTTG GTGCTGGAAG GTATTGAGTT GGCGCACCTT
GATTTAGGTG GCGGCTTGGG CATTCGTTAT ACCGATGAGC AGCCGCCATC GGCTGCCGAT
TGGGTGGATG CCGTCACCTC GGTTATCGAT CGACATCCGA TTGCGCGCCA CCTGCCTTTG
ATGTTGGAGC CGGGGAAGTT TTTGGTTGGG CCATCGGGCG TGTTGCTCAG CCGGGTGGAA
TACCTCAAGC CGCATCCGTC TGATGGCAAA TCGTTTGCCA TTGTCGATGC GGCGATGAAT
GATCTGGTTC GCCCAGCGCT CTATGGCAGC GTGATGGCGA TTGAGGCGGT CAAGCCAGAT
CCTGTGATGG CTGCCAAAGA TTGGGAGATT GTCGGGCCGG TGTGTGAAAC CGGCGATTTT
CTGGGCCATG GCCGGTCTTT GGCACTCGCG CAAGGCGATT TGATTGCGGT GCTGGGTGCC
GGTGCCTATG GTTTTTCCAT GGCGTCGAAC TACAACACCC GTGGCCGAGC GGCGGAAGTA
TTGGTCGATG AGCGCGGCGC AACATTGATT GGTGCGCGCG AGTCGGTGGA ATCGCTGTGG
GCGCTCGAGT CGATTCCGCC CAGTTTGATG TAG
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| Protein sequence | MTALPYDHLT RSADQTLCLE GCALDQIAAE FGTPTYVYSR SAIERAYTEL TTAFGDRPHR
ICYAVKANSN LAILALLARL GAGFDIVSGG ELARVLKAGG AAEKIVFSGV GKTRDEIEQA
LRAGVGCLNV ESEAELARIS EVAAGLGVVA PISLRVNPDV DAKTHPYIST GLKDNKFGVP
IEQAPALYRH IARDANLKAV GIDCHIGSQI TDVSPFADAA RRVLALLDTL VLEGIELAHL
DLGGGLGIRY TDEQPPSAAD WVDAVTSVID RHPIARHLPL MLEPGKFLVG PSGVLLSRVE
YLKPHPSDGK SFAIVDAAMN DLVRPALYGS VMAIEAVKPD PVMAAKDWEI VGPVCETGDF
LGHGRSLALA QGDLIAVLGA GAYGFSMASN YNTRGRAAEV LVDERGATLI GARESVESLW
ALESIPPSLM
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