Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2132 |
Symbol | |
ID | 8535291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2287549 |
End bp | 2288553 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384509 |
Product | protein of unknown function DUF1022 |
Protein accession | YP_003263996 |
Protein GI | 261856713 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3660] Predicted nucleoside-diphosphate-sugar epimerase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTCAA AATTGCACGA AACATCATCG CAACCCAAAA TCTGGCTACT GACGAATGAT GCTGTCGGCT TGCGCAACCA GGCGGTTGGC TTGGCCGAGC ACATCGGCTG GCCATTTGAG GTCAAGCTGG TCAACTTAAC CAAACCGTGG CGCTGGCTAC CCGGTCACTG GCTACCCAAA GCACACACCC GCCTCACGCC GCAATCCTCT CAATTAAAGG CACCTTGGCC GGACATCATC ATATCCTGCG GGCGACTGGG CGCCGCGGCT GCGCTGGGTG TCAAACGCGC CAGTGGCGGT AGGGTATTCA CCGTGCACAT CCAGAACCCG CAGATGCCGC ATCATCTGGT GGATCTGATC GCACCGCCTC GTCACGACGG TTTGATCGGG CCGAATGTCG TCAATACCCG TGGCGCACTG CACAATGTCA CGCCTGAAAA AATCGAACAG GCCATCGCAG TGCAATCCGA ACGCTACCCA GACCTGAATT CAATCAAAAA GAATCAACCC ATCATTGGCG TGCTGATTGG CGGAAGTAAT GCGACCGCCA CCCTGACGCC AGAAAAAAGT CGAACACTGA TCGAAACACT ACGGAAAGTA GCCGCTGAAG AGAACGCTCA TTTATGGGTC ACGGCATCGC GACGCACAGG CACGGAAAAT ATCGCCGCCA TGAAAGCGGC GCTTGCGGGC ACAACGCACT GGTTCTGGAA CAACGAAGGC TCCAACCCCT ATCACGCGAT TCTCGGTATG GCGGATTATT TGATCGTGAC TGGCGATTCG GTGTCGATGG TGTCGGAAGC CGCCTCAACC GGCAAGCCAG TCTATACGCT GGATTTCGAC GGCTATTCTG GTCGTCTAAA CGATTTCCAT AGCGCATTGC GAGAAGAAGG CGTCACACGC TCGTTCGAAG GCAAACTGGA ACAGTGGCAA TACGCGCCCG TCAACGACAC GCCTCATGTT GCCCAGTTGG TACGTGAACG GTTTCATCAG CACCGAAGCA CCTAA
|
Protein sequence | MSSKLHETSS QPKIWLLTND AVGLRNQAVG LAEHIGWPFE VKLVNLTKPW RWLPGHWLPK AHTRLTPQSS QLKAPWPDII ISCGRLGAAA ALGVKRASGG RVFTVHIQNP QMPHHLVDLI APPRHDGLIG PNVVNTRGAL HNVTPEKIEQ AIAVQSERYP DLNSIKKNQP IIGVLIGGSN ATATLTPEKS RTLIETLRKV AAEENAHLWV TASRRTGTEN IAAMKAALAG TTHWFWNNEG SNPYHAILGM ADYLIVTGDS VSMVSEAAST GKPVYTLDFD GYSGRLNDFH SALREEGVTR SFEGKLEQWQ YAPVNDTPHV AQLVRERFHQ HRST
|
| |