| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1933 |
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| Symbol | |
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| ID | 8535091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2066164 |
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| End bp | 2067573 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384314 |
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| Product | glutamate synthase, small subunit |
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| Protein accession | YP_003263802 |
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| Protein GI | 261856519 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.889564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATC ATTTCCAATT TTTGAATGTG CCGCGCCAGG ATCCGGAAAA ACAACCGGCC
ACCGAGCGTG TGACTCAATT CGGCGAAATT TACGGCCAAT TCAATCCGGA GAAGGCTTCT
GAACAGGCCG ATCGCTGCCT CGAGTGCGGC AACCCGTACT GCGAATGGAA ATGCCCTGTC
CATAACTTCA TCCCCAACTG GCTGAAGCTG ATTGCCGAGG GCAACCTGCT TGAAGCGGCC
GAGATGTCGC ACAAGACAAA CTCGCTGCCT GAAATCTGTG GTCGCGTTTG CCCGCAGGAT
CGTCTTTGCG AAGGCGCTTG CACCCTGAAT GACGGCTTCG GTGCCGTCAC CATCGGCTCG
ATTGAAAAAT ACATTACCGA CGAGGCGTTC AAGCTCGGTT GGCGACCAGA CATGTCCAAG
GTCGTTCCGA CCAACAAGCG CGTTGCCATC GTCGGTGCCG GCCCAGCGGG ATTGGGCTGC
GCCGATATCC TCGCCCGTCA TGGCGTCAAG GCGGTGGTGT TTGATCGCCA CCCGGAAATC
GGTGGTTTAC TGACCTTCGG CATCCCCCCA TTCAAGCTCG AGAAATCCGT CCTGGAAACC
CGTCGACGCA TTTTCGAAGA AATGGGCATC GAATTCCGCC TGAGCACAAA TATCGGTACC
GACATCTCCA TGGATACCCT GCTTGAAGAA TACGACGCCG TATTTCTCGG CATGGGCACC
TACACGGCCA TGGAAGGCGG TTTTCCGGGC GAAGATCTCG ACGGCGTGCA CAAAGCATTG
CCCTTCCTGA TCGGCAACAT CAATCACCTG ATGAGCTACC CCGGCAGCGA TCCCTTTATC
GACGTTTCAG GCCAACGGGT CATCGTATTG GGTGGTGGCG ACACCGCCAT GGACTGCACC
CGAACCTCGC TCCGCCAGCA AGCGGCAAAA GTGACCTGCG TGTATCGCAG AGACGAAGAG
AACATGCCCG GTTCACGGCG CGAAGTCGCC AATGCGCGCG AAGAAGGGGC CGAGTTCCTG
TTCAACCGTC AACCAATTGA AATCGTTGGC GAAAACGGCC GCGTAACCGG CGTTCGCTTC
GTAAATACGC GTCTGGGTGA ACCGGACCAT CGTGGTCGCC GTAGCCCCGA AGTCATCCCT
CATTCCGAAC ATATCATCGA AGCAGATACC GTACTGATCG CTTTCGGTTT CCGACCCTCT
CCAGCGCCCT GGTTCAATCA GATCGGCATT GAAACCGATA GTAGCGGTCG CGTGATAGCC
AACCAGAGCA CACACAGTCC CGCATTCCAA ACCAAGAACG CCAAGGTGTT TGCTGGCGGC
GACATGGTAC GCGGCTCCGA TCTCGTTGTT ACGGCCGTAT TTGAAGGCCG CAATGCGGGT
TTTGGCATCC TCGATTATCT GGACGTTTGA
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| Protein sequence | MADHFQFLNV PRQDPEKQPA TERVTQFGEI YGQFNPEKAS EQADRCLECG NPYCEWKCPV
HNFIPNWLKL IAEGNLLEAA EMSHKTNSLP EICGRVCPQD RLCEGACTLN DGFGAVTIGS
IEKYITDEAF KLGWRPDMSK VVPTNKRVAI VGAGPAGLGC ADILARHGVK AVVFDRHPEI
GGLLTFGIPP FKLEKSVLET RRRIFEEMGI EFRLSTNIGT DISMDTLLEE YDAVFLGMGT
YTAMEGGFPG EDLDGVHKAL PFLIGNINHL MSYPGSDPFI DVSGQRVIVL GGGDTAMDCT
RTSLRQQAAK VTCVYRRDEE NMPGSRREVA NAREEGAEFL FNRQPIEIVG ENGRVTGVRF
VNTRLGEPDH RGRRSPEVIP HSEHIIEADT VLIAFGFRPS PAPWFNQIGI ETDSSGRVIA
NQSTHSPAFQ TKNAKVFAGG DMVRGSDLVV TAVFEGRNAG FGILDYLDV
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