| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1752 |
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| Symbol | |
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| ID | 8534910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1881738 |
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| End bp | 1883519 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646384134 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003263622 |
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| Protein GI | 261856339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGCC GTGTGTTGTG GTTTTCACCG GTTGTCTTTT TGCTTGTGCT GTTTCTGAGC
GTGTCTGCGG CGCAGGCGGC CAGCGGGAGA CCTCAACTGC AACTGACCGG CGAGATCACC
CAAGCCGAGA ACAAAGCGCT GATTCTCCAG GTGGGGCTTT CTGTTCCGCC GATTCGCTTT
ACGTGTGATG CCTCGCCGGT ATTGATGCGG CGCTATTTGC AATCGGCCAC CCTGGCGGCG
CGGGATGCGC TGCGAGCCAT GGGCTATTTC AATGCACAGA TTCAAACCCA TTTGAAACAA
GATCCTGATT GCGCCATACC GACGATGGAC ATTACCCCTG GCCCAAGGGT GCATATTGCT
GCCGTTGATG TAGTCGTGAC CACGTCGGCA GGGGACGATC TGACTCGACA GGCGTTTCTG
CGTGACTACC TCAAAAAAGC GCGTCCGGCG AAGGATGCGC TTTTAAATCA GGGCGTTTAT
GTCGCCCTGC GTGACGGCAT CATGGAGCGC GTGCGTGGGG CGGGGTATCT GGATGCCAAA
TGGCGAAGGC ATGAGTTGTT GGTCGATCCG AAAACCAACA CGGCGGACAT TCAGCTTGAT
CTGGATGCGG GCAGCCGCTA CCACATCGGC AAGATCACCA TCGATCAGTC GATTATCAAG
CCGCTGTTAG CGCAGAATCT GGTCGGTGCG AAAACCGGCG ATACCTACAC CACGCAAACG
CTGGTGGACA TGAACCAGAA TCTGTCGAGC AGCCAATATT TCAGCGACGT GCGGGTGCGC
CCGCAATGGG ATCAGCGCAC GGCGCATCAG GTGCCCATCA CGATTCGCAC CCTGCCGAAT
GAGCCGCGCA GTTATGAACT GCGTGTGGGC TATGGCACGG ATACGGGCGC GCGCTTCGGC
GGCAAAATCA CCCAACGGTA CGTGAACCGC TCCGGCCATT CGTGGAAAGC GGATTTGTCC
TTGGCACAAC GCAAACAAAC GCTCGGTGCC ACCTACACCA TGCCGAAAAT CTCAGACCCC
CTGAATCAGC ATTATGACCT TTATGAGGTG TTTGATCGGG AGCAGGACAC CGGCATCACG
ACGCTATCGT CGACAACGGG CCTGCGCTGG GTGCGCAATT TCAATTCGTG GACGAGCTCC
TTGTATAGCG AATACTTGGT CGACCGCAGT CAGTTCGGCA CCAATCCCGC ACAAACGACC
GGTTTTTGGT TGTTTGGTGC GCGTTTGGGC CGCCAGGAGC TTAATGATCC GCTGTTCCCG
ACCAAAGGAT TCGTGTTCAG TAGCGGTATC AGCACGGCGG CAAAACCGTT GCTCTCTAGT
ACCTCCCTGT TGCGCGCCCA CGTGATGCTG GGCGGGCTTT ATCCAGTGGG AAAATGGGTG
TTCAAGGCGC GCACCGAAGT GGGTGGCGTG GTGACGCCCG ATTTCAATTC TTTGCCAAAA
AGCCTGCGTT TTTTCGCCGG TGGTGATCAA TCCGTGCGCG GTTATGCTTA TCAATCGTTG
GGCCCAACCG ATTCGACCGG TCAGGTGATC GGCGGGCAAT ACCTGTTTAC GGCCAGTGCC
GAGGTGATGC ATCCCGTATA CGGGCGCGAT TGGTGGGGCG CGGCGTTTGT CGATACGGGC
AACGCCTTTG ATGCGTTAAA CAACATTCAT TTGAATACGG GTGCGGGCGT CGGCATCCGC
TGGCGTTCGC CGGTGGGCAT GGTGCGCGTG GATGTGGCTT ATCCGTTTGA TGGCGATCAA
CGCACACCCC GATTGCATTT GGGCATCGGG GCGGCCTTTT GA
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| Protein sequence | MFGRVLWFSP VVFLLVLFLS VSAAQAASGR PQLQLTGEIT QAENKALILQ VGLSVPPIRF
TCDASPVLMR RYLQSATLAA RDALRAMGYF NAQIQTHLKQ DPDCAIPTMD ITPGPRVHIA
AVDVVVTTSA GDDLTRQAFL RDYLKKARPA KDALLNQGVY VALRDGIMER VRGAGYLDAK
WRRHELLVDP KTNTADIQLD LDAGSRYHIG KITIDQSIIK PLLAQNLVGA KTGDTYTTQT
LVDMNQNLSS SQYFSDVRVR PQWDQRTAHQ VPITIRTLPN EPRSYELRVG YGTDTGARFG
GKITQRYVNR SGHSWKADLS LAQRKQTLGA TYTMPKISDP LNQHYDLYEV FDREQDTGIT
TLSSTTGLRW VRNFNSWTSS LYSEYLVDRS QFGTNPAQTT GFWLFGARLG RQELNDPLFP
TKGFVFSSGI STAAKPLLSS TSLLRAHVML GGLYPVGKWV FKARTEVGGV VTPDFNSLPK
SLRFFAGGDQ SVRGYAYQSL GPTDSTGQVI GGQYLFTASA EVMHPVYGRD WWGAAFVDTG
NAFDALNNIH LNTGAGVGIR WRSPVGMVRV DVAYPFDGDQ RTPRLHLGIG AAF
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