Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1723 |
Symbol | |
ID | 8534881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1851605 |
End bp | 1852003 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384105 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003263593 |
Protein GI | 261856310 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0662] Mannose-6-phosphate isomerase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.410123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAAT CCGCACGGCA TAAACGCCGA ACGCCAATTC AGGGCGCATT TTATCTCAAA CACCGGGCTG ATTGCCCGGT AGTCACGCAG GCAGACGGCC TGACGCTAAG GTATTTGCTG CCCCAGAACA GTGTGGAAAA AAGCACGACG ACAATAGGCC TGCAGGAAGT GGAACTGCAA CCGGGCACAC AAACCGACGG ACACTCCGCT GCGGGCGAGC AGATCGTGTG GCAAATCCTG CAAGGTGCGG GGCTGATGAA TTTGGGTGAA ACGCAGTTTG CGGTCGTGCC CGGCGACATC ATCCTGATTC CAGCGGATCA ACCCTATCGT CTCACCAACA AGTCTGAAGT TGCATTACGG CTCAATCAGA TCACAACGCC AATCCCCAAC CCTTCTTAA
|
Protein sequence | MTKSARHKRR TPIQGAFYLK HRADCPVVTQ ADGLTLRYLL PQNSVEKSTT TIGLQEVELQ PGTQTDGHSA AGEQIVWQIL QGAGLMNLGE TQFAVVPGDI ILIPADQPYR LTNKSEVALR LNQITTPIPN PS
|
| |