| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1486 |
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| Symbol | |
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| ID | 8534644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1607943 |
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| End bp | 1609169 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383877 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003263365 |
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| Protein GI | 261856082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.721781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTGGA CGAATCTATC CCTTTGTGAA AAAGATTTTA AAAATATGAT TTATAACAAA
TTACATCGTA CTTTGCTTCT CTTGCTGCCC ATTGTTGCCT TGTCAGGCTG TGTAACGACA
CCGGGTTGGA TGATGCGTGA TGGGCCTTCC TCTAACGACA TCACTGACCT GGCAGTGAAG
CCTAATGCGC CCGTTTTATT GCTTCCTATT GATGCACAAA TTAATCAAAT GCTCGCAGTA
GCGCAGAAAC ACGACAATTT TGCCTTGGGC TTGTCTGCCG CGCCAAAACC CAATTATGTC
ATTGGGCCAG GTGATGAGCT GAATGTGAGT GTTTGGGAAG CGCCACCACC GGTGCTGTTT
ACTTCCGGCT TGGCGAGCGT GACCGGGGGC ATGGGGTCAA GCGCAGGCAA TGTTACGTTC
CCGGCTCAGC GCGTCAGTTC GGATGGGACC ATTTCGATTC CGTTCGCCGG TACGATAAAA
GTCGCCGGTC TTTCGCCACA ACAGGTCGCT GCGCGTATTC GTAAGGCCTT AAAAGGGCTG
GCAAATGATC CGCAAGTGCT TGTGCAGGTG CCTAGTAACG CGAGTGCCAT GGTGACTGTT
GTCGGCGATG TGCAGCAAAG TATTCGAATG CCACTCACTG CGGCGGGTTT GCGTTTGCTG
GATGCTTTGG CGGCGGCAGG GGGAACAAAA GATCCGGTCG ATAAAGAAAC GGTGCAGATT
ACGCGCGGTA AAGAGGTTTT ATCTGTGCCC TTGCGCAAGG TGATCGACAA CCCTACCCAG
AATGTGGCGT TGGCGCCCAA TGACGTGATA ACGGTTCTGA ACAAGCCGAT GAGCCTGACC
GTGCTGGGCG CGGTTGCTAA AAATGATGAA TTGAATTTTG AAGCGCAGGG CATCTCGTTG
GCTCAGGCAT TGGGCCGTGC GGGCGGGCTG CTGGATAACC GTGCCGATGC GCGCGCGGTG
TTCGTGTTTC GATTTGAGCA GCCTGGCGTG TTGGGCAAGC TCGCCAAAAG CGCTCCACAC
CTTCAAAATG GTGACGTACC GGTGGTATAT CAGCTTAACT TGATGAATCC AGCGGCTTTG
CTCATGGCGC AAAATTTCCC CATGAAAAAC AAAGATGTGC TGTATGTGGC CAATGCGCCA
GCGGCTGAGT TCCAGAAGTT TTTAACCATT ATTACCTCAT CGATATATTC AGTTGATCGA
GTGGTAAACA TTTCCGCCGG TAACTAA
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| Protein sequence | MAWTNLSLCE KDFKNMIYNK LHRTLLLLLP IVALSGCVTT PGWMMRDGPS SNDITDLAVK
PNAPVLLLPI DAQINQMLAV AQKHDNFALG LSAAPKPNYV IGPGDELNVS VWEAPPPVLF
TSGLASVTGG MGSSAGNVTF PAQRVSSDGT ISIPFAGTIK VAGLSPQQVA ARIRKALKGL
ANDPQVLVQV PSNASAMVTV VGDVQQSIRM PLTAAGLRLL DALAAAGGTK DPVDKETVQI
TRGKEVLSVP LRKVIDNPTQ NVALAPNDVI TVLNKPMSLT VLGAVAKNDE LNFEAQGISL
AQALGRAGGL LDNRADARAV FVFRFEQPGV LGKLAKSAPH LQNGDVPVVY QLNLMNPAAL
LMAQNFPMKN KDVLYVANAP AAEFQKFLTI ITSSIYSVDR VVNISAGN
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