Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1463 |
Symbol | |
ID | 8534620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1577267 |
End bp | 1579363 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383853 |
Product | polyribonucleotide nucleotidyltransferase |
Protein accession | YP_003263342 |
Protein GI | 261856059 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTGG CCGTTTTTAC CGAACAATTT GATTATGGAC GTCATTCTGT CACCTTGACC ACGGGAGAAA TTGCCCGCCA GGCTTCTGGT GCCGTGATGG TGCAGATGGG CGATACGGTG GTACTGGTGA CTGTTGTTGT CGAGAGCGCA CCGGAGCCCG GGCAGGACTT TCTGCCGCTG ACCGTCGAAT ATCAGGAAAA GTTTTACGCG GCTGGTCGCA TTCCCGGTGG TTTCTTCAAG CGGGAAGGGC GGTCGACCGA AGCGGAAACC CTGATTGCCC GATTGATCGA TCGTCCGTTA CGTCCCCTGT TTCCCAAGGG ATTTTATAAT CAGGTTCAGG TGATTGCCCA GGTGCTATCA CTCGATCCCG AAGTGCCCGG CGACATTCCC GCCATGCTCG GTGCTTCAGC AGCGCTGGCC TTGTCGGGTC TGCCTTTTGA TGCACATTTG GGTGCAGCAC GCGTCGGTTA TATCAATGAG GCGTTTGTGT TGAATCCAGC ACAGACCGAA ATGGCCGATT CTCGGCTTGA ACTGGTGGTG GCGGGTACCG AAGAAGCCGT GCTCATGGTC GAATCAGAAG CAGATCGCTT GCCGGAAGCC ACGATGCTAG ATGCAGTCAT GTTCGGTCAT GAGGCGGCGC AGTCGGCGAT TGCGGCGATT CGTCGTCTCG CTGCCAATGC GGCACGTCCT GCCATGGCCT GGGCGCCTCC GGTTGAGCAT CCGGATCTGG AAGCCAAAAT CCGTACGGCA TTTGGTGATT CGATTGCCGA GACGTATCAA ATCGCCGAAA AACAGCAACG CTACCTGCGC TTGAATGAAT TGCGTGAAGA AGCCATTGCC CAGTTTGCGG ATGATGTTGC TGTGCCGGCC AAGTTGGTTT CATCCCTGAT CGAGTCATTG GAATCATCGG TTGTGCGCGG TCGCGTTCTG GATGGCGCGG CGCGCATCGA TGGTCGCGAT ACCAAAACCA TCCGCCCGAT TACCGTACGA ACCGGTGTGC TGCCCCGCGT TCACGGTTCG GCGCTTTTTA CCCGCGGTGA AACGCAGGCT TTGGTTGTGA CGACGCTCGG GTCGGCACGC GATGCGCAAT TGATCGATGC GGTGGTGGGT GAGTACAAGG AGTCATTTAT CTTCCATTAC AACTTCCCGC CCTACAGCGT GGGTGAGACC GGCCGGTTTG GTGCGCCCAA ACGACGCGAA ATCGGTCACG GCAATTTGGC TCGTCGCGGG GTCAAGGCCG TTATACCAAA CCCGGAAAAT TCTCCGTACA CACTGCGCGT GGTGTCGGAA ATCACCGAGT CCAATGGCTC AAGCTCTATG GCCAGCGTGT GTGGCGCATC CTTGTCGATG ATGGATGCCG GTGTGGAAAT CGCGGCGCCG GTAGCCGGCA TCGCGATGGG CCTGATCAAG GAAGGCAATC GCTTTGTTGT GCTTTCCGAC ATCCTTGGAG ATGAAGATCA TCTTGGCGAT ATGGATTTCA AGGTTGCCGG TACCGCCGAT GGGGTTACTG CCCTGCAAAT GGACATCAAG ATCAACGGAA TTACCCGTGA GATCATGAGT CAGGCGCTTG ATCAGGCCAA GGGTGGGCGG CTGCACATTC TGGGTATCAT GAACGCGGCA CTTGCCGCGC CGCGCAAGAG CGTTGCCCCG AACGCCCCCC AATTCATCAA GTTCAAGATC AACCCGGACA AGATCCGGGA GGTGATTGGC AAGGGTGGAG CGACGATTCA GGGCATTACC CGCGATACCC ATACACAGAT CGATATTTCA GACGATGGCC AGATCACGAT TACGGCGACA TCCGCCGAGC AGGGCGAGGA AGCGCGTCGA CGCGTCGAGC AAATCACGGT CGAGGCCGAA GTTGGCAAGA TTTATGAGGG CAAAGTGGTG CGAATCACCG ATTTCGGCGC TTTTGTGAAT ATCCTGCCGG GTAAGGATGG TCTGCTGCAT ATCTCGCAAA TCAGTGATGA GCGCGTCGAA CGTGTGACCG ACAAGCTTCA GGAGGGTGAT AATGTTCGCG TACTTTTGCT TGAGTTGGAT AAGCAAGGTC GTATGCGCCT GACCATGAGG GGGCTGGATG CTCCGCAGAC GGAATAA
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Protein sequence | MPVAVFTEQF DYGRHSVTLT TGEIARQASG AVMVQMGDTV VLVTVVVESA PEPGQDFLPL TVEYQEKFYA AGRIPGGFFK REGRSTEAET LIARLIDRPL RPLFPKGFYN QVQVIAQVLS LDPEVPGDIP AMLGASAALA LSGLPFDAHL GAARVGYINE AFVLNPAQTE MADSRLELVV AGTEEAVLMV ESEADRLPEA TMLDAVMFGH EAAQSAIAAI RRLAANAARP AMAWAPPVEH PDLEAKIRTA FGDSIAETYQ IAEKQQRYLR LNELREEAIA QFADDVAVPA KLVSSLIESL ESSVVRGRVL DGAARIDGRD TKTIRPITVR TGVLPRVHGS ALFTRGETQA LVVTTLGSAR DAQLIDAVVG EYKESFIFHY NFPPYSVGET GRFGAPKRRE IGHGNLARRG VKAVIPNPEN SPYTLRVVSE ITESNGSSSM ASVCGASLSM MDAGVEIAAP VAGIAMGLIK EGNRFVVLSD ILGDEDHLGD MDFKVAGTAD GVTALQMDIK INGITREIMS QALDQAKGGR LHILGIMNAA LAAPRKSVAP NAPQFIKFKI NPDKIREVIG KGGATIQGIT RDTHTQIDIS DDGQITITAT SAEQGEEARR RVEQITVEAE VGKIYEGKVV RITDFGAFVN ILPGKDGLLH ISQISDERVE RVTDKLQEGD NVRVLLLELD KQGRMRLTMR GLDAPQTE
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