Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1457 |
Symbol | |
ID | 8534614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1572272 |
End bp | 1572898 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383847 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_003263336 |
Protein GI | 261856053 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCC TTCTTGAAGT CCACCCCGAG TCGCCGCAGC CCCGATTGGT GACTCAGATC GCCGAAGCTT TATCCGATGG TTCGGTCATC GTTTTGCCAA CCGATTCCGG TTATACCCTT GCCTGTCGGC TGGAGGATAA GACGGCCTTG GCTAAAATTG CGCAGATTCG CCGCGACAAT GAACCGCATC ACATGACGCT GTTGTGCCGA GATCTGTCTG AAATCAGTAC CTACGCCAAG CTTGACAATC AGCATTACCG CTTTCTTAAA ACACACACGC CGGGGCCATA TACATTCATC CTCGAAGCGA CGAGCGAAGT GCCTCGACGT TTACTGCACG CCAAGAAACG TTCGATCGGT TTGCGCGTAC CGCAAAACAC GGTGTTGCGC TCGGTGCTTG AAGAATTGGC AGCCCCCATT CTCAGCGCGT CATTGGTTTT GCCTGATCAT AATGAACCGC TGGAAGACCC GGAATGGTTT CCAAGAGCAG TCGAGCGTCA GGTTGATATG ATTGTCAGTA CGGGGTTTCA CGCACAGAAT CCGTCGACGG TGATCGACAT GACGGGCGAC GAATTCGTGC TCGTGCGGGA AGGCTTGGGC GGCATCCCGC CAGAACTTGA GGATTGA
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Protein sequence | MSTLLEVHPE SPQPRLVTQI AEALSDGSVI VLPTDSGYTL ACRLEDKTAL AKIAQIRRDN EPHHMTLLCR DLSEISTYAK LDNQHYRFLK THTPGPYTFI LEATSEVPRR LLHAKKRSIG LRVPQNTVLR SVLEELAAPI LSASLVLPDH NEPLEDPEWF PRAVERQVDM IVSTGFHAQN PSTVIDMTGD EFVLVREGLG GIPPELED
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