Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1343 |
Symbol | |
ID | 8534499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1455294 |
End bp | 1456124 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383734 |
Product | protein of unknown function DUF548 |
Protein accession | YP_003263224 |
Protein GI | 261855941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.069675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACGGTTT CTGCGTCACT TTCTTGGACT GATAAAGTCC GTTTGGTCTT GCCAACCGCT GATGCAGATC GGCGTGAAGT CAGCCTGATT CAGCAGGCGC AGCTTCTTCC TATCCCCACA GTCTGTTCGG AAGAATTGGC TGAAATCCAG CCCGATCATT TTGTTCTGCG ATATTCGGAT GGTTGTTGGC AGTTGTTTCC ACCAACAGAT AATGATGCGT TTGGTCGTCA TTCCCTTGGT ATCGATTTCG TCCAGAACGC TCGTTTCAAT CAGCCAATGA CTTTGCGTGA ACCGCTGGCA AAAGCGGCAG GTTTGCGCGC TAATCGGCGC CCCGTTGTCA TCGATCTGAC GGCTGGACTT GGGCGTGATT CCTGGGCACT TGCCAGTACG GGCTGCACCG TGTTTGCTTT CGAACGACAT CCACTGATTC ACTTTTTGTT ATCTGATGCG TTGCTGCGCG CGCGGTTGGA GCCCAAGACG CATGATATTG CATCGCGTAT CCATCTTTAT GGTTCGGACG CCCGTGAGGC ATGGCCTGAG AACATCAAAC CCGATAAAGA TACGGTTTGG TTGATGGATC CGATGTTCCC GGAGCGGCAG AAGTCCGCGC TGGTGAAAAA GGATATGCGC ATCTTTCATG ATCTGGTGGG TAGTGACGAG GATGCCGATG CGCTGTTCGT GTGGGCGCGT CAGCAACCGG CGAATCGGTA TGTGGTCAAG CGCCCGCCAC AGTCGCCCGC TTTGGCTGGT GCCCAGCCAT CAATGAGCAT CAGTAGCGGT CGGGTCCGTT TCGATTGTTA TATCAAGCCT GCGGCTTCCC TCTCGCAGTA A
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Protein sequence | MTVSASLSWT DKVRLVLPTA DADRREVSLI QQAQLLPIPT VCSEELAEIQ PDHFVLRYSD GCWQLFPPTD NDAFGRHSLG IDFVQNARFN QPMTLREPLA KAAGLRANRR PVVIDLTAGL GRDSWALAST GCTVFAFERH PLIHFLLSDA LLRARLEPKT HDIASRIHLY GSDAREAWPE NIKPDKDTVW LMDPMFPERQ KSALVKKDMR IFHDLVGSDE DADALFVWAR QQPANRYVVK RPPQSPALAG AQPSMSISSG RVRFDCYIKP AASLSQ
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