Gene Hneap_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1174 
Symbol 
ID8534327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1278257 
End bp1279225 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content55% 
IMG OID646383564 
Producthypothetical protein 
Protein accessionYP_003263057 
Protein GI261855774 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAC AAGACAACGA TTTGCGCACA ATCATACATG CCTTGGGTGA TGACGTACCC 
ACAACCGATG CGGCTGACAT TCGAAAAGAT GCCACACCCG ATGTTGAACC CGAACCTCTT
TTACCCCCGG CCCGTAGCCA TTGGCTGAGT CGGCTGATTG CGACCGCTTT GCTCGTCTGG
ATGGGTGTGG TCTGGAGTCA GGCCGTCGTT TGGGGGTGGT CGCTCAGCAT CTGGGCAGGC
GTTGCACTTC TTGCGATTGG AAGTGCACTC ATTGTCGGGT TCCTGATACT GGCGTGGCAG
GCACACTGGG CGAGACGGCA GATTGATGAA ATTGCCCGCA TTCAAGCCTA TTTTAAGCAG
GCAATCAGCA ATCCCCACGC AACTCAGGGC GGCTTGAATG AATGGGTGCA AAGAATCAAA
CACCTCTATC GGCGAAGTCC ACGTCGCGAC GATCTATGGG AAGGTTTGGC CATTGTGGAT
GAGAGTTGGA GCACCAAGGA ACTCGCCGAT CATCTCAGCC GGTGGTACGG AGCGCAGGAT
ATACAGGCTG CGCAACTGGT AAAACGCGAA TCGACACGAA CAGGGGTGTT TATCGCCGCC
AGTCCCTATC CCGCGCTTGA TTTGCTTCTG GTTGCCTGGA GAAATGCAGC CATGGTCGAA
CGTGTGGCGG CAATTTATGG GCTGAAGTTA TCCGCCACCG CACGCTGGCG TTTGTATCAG
ATGATTCTGA AAAACATTGC CTTTACCACG GTCACCGAGA CAATGCTCGA TTCGGTCAGC
CAGAGCTGGC TATCGAATGT CCTGCTGCAG GTCGGCGTGC GGGCAGGGCA GGGCGTGGGT
GTTGCGCTGT ACTCGATTCG AATCGGCCAT CAAACAATGA AGCTGTGTCG GGTCGTGCCA
GAAGATCGTC CTTTGGTTGA TCGGAATATT GCCAAGATGG TTGTTGATGC GGTTCGAGGC
AAGGCGTAA
 
Protein sequence
MNEQDNDLRT IIHALGDDVP TTDAADIRKD ATPDVEPEPL LPPARSHWLS RLIATALLVW 
MGVVWSQAVV WGWSLSIWAG VALLAIGSAL IVGFLILAWQ AHWARRQIDE IARIQAYFKQ
AISNPHATQG GLNEWVQRIK HLYRRSPRRD DLWEGLAIVD ESWSTKELAD HLSRWYGAQD
IQAAQLVKRE STRTGVFIAA SPYPALDLLL VAWRNAAMVE RVAAIYGLKL SATARWRLYQ
MILKNIAFTT VTETMLDSVS QSWLSNVLLQ VGVRAGQGVG VALYSIRIGH QTMKLCRVVP
EDRPLVDRNI AKMVVDAVRG KA