| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1148 |
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| Symbol | |
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| ID | 8534300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1247515 |
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| End bp | 1248606 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383537 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003263031 |
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| Protein GI | 261855748 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCA ACCCCGGGCC ACTGGATCAG TTGTTGTATC ACGGCGCTCC GCCCATTCTG
CAAGGGCAGT TGAAACAATC TCCATCAGAC TTCCGCGTGG ATGAAATCCT CGGGTTTGAA
CCGGACGGAG AAGGTGCCCA CGGTCTGTTT CTGGTCGAGA AAACGGGAAT CACCACGGGG
CAGATGCTGG GGCTACTGTC CAAATTATCC GGTGTGGCAG AAAGAGACAT CGGCTTTTGC
GGCATGAAGG ACAAACTCGC GGTCACATCC CAGTGGGTCA GTCTGCCTTT GATGCCATCG
CATTCATTAG AGAACCCTCC GGATTGGATC GATGCATTAC CCGATCACGT AAAAGTGCTT
CGCTGGAACC TGCATCGCAA GAAGCTGCGT CGGGGTAGTC ATCGGGGTAA CCGCTTCACT
GTTACGATTC GCGATGTCAT AGGGCATGAC CCAGAACTTC GGCAACGAAT TGAAAGGTTA
GAGTCGCAGG GTTTTCCCAA TTACTTTGCC GAGCAGCGGT TCGGGCATGC GGGAAGCAAC
TATGCCTTGC TCGAAAAGCT GGGACGATTA TCGAACGCCC GTTCAATTAG TCGCGCTGAT
CGAAACTGGG GCATATCGAC GCTCAGAGCT GAAATCTTCA ACCGGGTCTT GTCCGATCGT
CTGTCCCAAA ACACTGAAGC CACCGCTAAA CCTGGCGATC TGGCCCGTCT TGCGGGCACA
AATAGTTGGT TTTTAGTTGT CGAGGAAGAG TTGAACAACA CACAGCAAAG AATTGATACC
AAAGATATTT GGCTTACGGG GCCGCTCTGG GGTGAAGGAC CGAGTCCCGC CTTTGGAGAT
ATTAAGACTG AGGAAACCCG AATCGTAGAA GAAGTTTTAA CGAGCTACGG CTCGGAGAAT
TGGTCGAATC ACCTGCGCGA CTGGCGGGTT GAACATGATC GACGCGCTCT AATGGCACCG
ATAACCAATT TGCAGTGTGA AGAAAAGACA GAGGAGGGCA GCCGTATCCT CAATCTGTCA
TTTGCATTGG AATCAGGAAG TTATGCGACA GCTTTGCTTC GGGAAATTAT TGATCTGACA
CCGGCAGATT GA
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| Protein sequence | MSANPGPLDQ LLYHGAPPIL QGQLKQSPSD FRVDEILGFE PDGEGAHGLF LVEKTGITTG
QMLGLLSKLS GVAERDIGFC GMKDKLAVTS QWVSLPLMPS HSLENPPDWI DALPDHVKVL
RWNLHRKKLR RGSHRGNRFT VTIRDVIGHD PELRQRIERL ESQGFPNYFA EQRFGHAGSN
YALLEKLGRL SNARSISRAD RNWGISTLRA EIFNRVLSDR LSQNTEATAK PGDLARLAGT
NSWFLVVEEE LNNTQQRIDT KDIWLTGPLW GEGPSPAFGD IKTEETRIVE EVLTSYGSEN
WSNHLRDWRV EHDRRALMAP ITNLQCEEKT EEGSRILNLS FALESGSYAT ALLREIIDLT
PAD
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