Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1101 |
Symbol | |
ID | 8534249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1189840 |
End bp | 1190991 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383486 |
Product | urea ABC transporter, permease protein UrtC |
Protein accession | YP_003262984 |
Protein GI | 261855701 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTTCA AGACATTATT TGCAGGCCAT GAACGGGGCG GCTTAGTCGT GATGCTGGCG ATTGTGCTCA TGTTGTTGTG GGTCAGTATC GGCAATCTGG CAGTGCCCGC GAGCAGCCCA TGGCATGTTT CCACCTATAC CGTGACTATC CTCGGCAAAT TCCTCACCTA TGCCCTGTTG GCCGTATCGA TTGATTTGAT CTGGGGTTAT GCCGGCATTC TTTCGTTGGG GCATGGCGCA TTCTTCGCAC TCGGTGGCTA CGCGATGGGC ATGTACCTGA TGCGTGAAAT TGGTGATCGC GGCCAGTACG GCAATCCCGA TCTGCCGGAT TTCATGGTGT TTTTGAACTG GCATGAACTG CCGTGGTACT GGTACGGCTT CGATCATTTT TGGTTTGCCG CCCTGATGGT GCTGCTGGTG CCGGGCATCT TGGCTGGTTT ATTCGGCTGG CTGGCGTTTC GCTCGAAAGT CTCCGGCGTG TATTTCGCCA TCATTACCCA GGCGCTAACG TACGCACTCA TGCTGGCTTT TTTCCGCAAC GAGATGGGCT TTGGTGGCAA TAATGGCCTA ACGGATTTTA AAGATATTCT CGGGTTTCCC ATCGCCGAAA ATGGCACCCG CGTGGGCTTG TTTGTCGCCT CGGGTATTGC CCTGATCCTT GGCTACTTTA TTGCCCAAGC CATTGTGCGC TCACGCTTCG GGCGGGTGTT GGTCGCGATT CGAGATGCCG AGCCGCGAAC CCGCGCCTGC GGTTATCCGG TGGCACGATA CAAACTGGTC GTGTTCGTGA TTTCCGCCAT GCTGGCCGCT GTTGCGGGCG CATTGTATGT GCCGCAGGTT GGCATCATCA ATCCCGGCGA ATTCTCGCCT TTATCGTCGA TCGAAGCGGT TGCCTGGGTG GCAACCGGTG GTCGGGGCAG CCTGTTTGGC CCCATTATCG GTGCCTTCGC CGTCAACTAC AGCAAAACAC AACTCACTTC ATTGGCACCG GATTTATGGC CGTTCGTGCT TGGCGGACTG TTCATTCTGG TCACCGTCTT TCTACCCAAA GGGCTGATCA GCTTGCTGGC GCGGCGCAAG AAAGCCCATA AGCCCGCAGC CGATAAACCG ACAACGTCCC CAGCGACAGA CAGCAAACCG GAGGTTCTGT AA
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Protein sequence | MLFKTLFAGH ERGGLVVMLA IVLMLLWVSI GNLAVPASSP WHVSTYTVTI LGKFLTYALL AVSIDLIWGY AGILSLGHGA FFALGGYAMG MYLMREIGDR GQYGNPDLPD FMVFLNWHEL PWYWYGFDHF WFAALMVLLV PGILAGLFGW LAFRSKVSGV YFAIITQALT YALMLAFFRN EMGFGGNNGL TDFKDILGFP IAENGTRVGL FVASGIALIL GYFIAQAIVR SRFGRVLVAI RDAEPRTRAC GYPVARYKLV VFVISAMLAA VAGALYVPQV GIINPGEFSP LSSIEAVAWV ATGGRGSLFG PIIGAFAVNY SKTQLTSLAP DLWPFVLGGL FILVTVFLPK GLISLLARRK KAHKPAADKP TTSPATDSKP EVL
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