| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0830 |
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| Symbol | |
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| ID | 8533971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 901866 |
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| End bp | 903188 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383217 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_003262722 |
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| Protein GI | 261855439 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.787095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATGG AAGTTCTTGC GATCGTCATG GTTTTTTCGT TGTTCGCGCT TATCCTGGGC
GGCATTCCTG TACCGTTTGC TCTGGCGGTT AGTGGCTTAG TTTTTGGCCT GATCGGTTTC
GGGTCGGATT TGTTCAACCT GTTACCTCTT CGCATTTTTG GCATCGTCAG TAACTACACG
CTGCTGGCGA TACCCCTGTT TGTCTTCATG GGCGTACTGC TGGAAAAATC CCAGCTGGCC
GAACGAATGC TGGACATCAT TGGCCATGTT TCCGGGAAGA AATCCGGCGG CATGGCCATC
GCCATCATCC TGATCGGTGT GCTCATGGGC GCCTCAACCG GCATCGTGGC CGCCACGGTG
GTCACGGTCG GCCTGATCAC CCTACCCACC CTGCTCCGGC GCGGTTACGA CAAACGTATC
GCTTGCGGCA CAATCTGCGC AGCGGGCACG CTGGGGCAGA TCATCCCACC CAGTCTGGTG
CTCATCATCC TGTCGGACAT TTCCGGCACA TCGGTTGGCT CCCTGTTCGC GGCAGCACTG
ATTCCGGGCC TGATGCTCGC AGGCATGTAT CTGCTGTACA TCGTGATCAT GAGTAAGCTC
AAGCCGAACT CCATGCCACC CATCCCACAG GATGAGCGTG ATGCCATGCC TACGGGGCAG
CTGATCATGG ACCTCCTCAA GGTTGTCCTC CCGCCGTTCG CGCTGATCTT TGCAGTCTTG
GGCTCGATTA TCGGCGGTAT CGCGGCACCC ACTGAAGCGG CATCAATGGG TGCGCTGGGA
GCCCTGCTGG TCGTGATTCT GTCTGGCCGG TTCAGTTATC ACGTGATACG CGAAACCGTG
TACTCCACCT TCAAAATCAG CGGCATGACC TTCTTCGTCC TGATTATGGC TCAGATCTTC
AGCTTGAGCT TCCGTGGACT CGGCGGCGAC GACCTGATCG ATTCCTTGTT TGAGTTTCTC
CCAGGTGGCG TCTGGGGCGC GTTGATTTTC ATGATGGTTC TGCTGTTCCT GCTGGGATTC
TTCCTGGACT GGATCGAGAT CTCGTACATC GTACTCCCAC TGATGTTGCC GTTCTTCCAT
CATGCGGGCA TCGACCTCGT CTGGCTCAGC ATCCTGATCG CCATGAACCT GCAGACATCC
TTCCTTACCC CACCCTTTGG CTGGTCACTG TTCTATCTCA AGGGCGTCGC ACCCAAGGAA
GTTCTCACCC AGGATATTTA TCGAGGCGTC ATGCCCTACA TCGGCATCCA GGCATTTGCG
CTGACACTCG TCATGATTTT CCCGGGGATC GCCACCTGGC TGCCAGGCGT GGTGGGCTGG
TAA
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| Protein sequence | MEMEVLAIVM VFSLFALILG GIPVPFALAV SGLVFGLIGF GSDLFNLLPL RIFGIVSNYT
LLAIPLFVFM GVLLEKSQLA ERMLDIIGHV SGKKSGGMAI AIILIGVLMG ASTGIVAATV
VTVGLITLPT LLRRGYDKRI ACGTICAAGT LGQIIPPSLV LIILSDISGT SVGSLFAAAL
IPGLMLAGMY LLYIVIMSKL KPNSMPPIPQ DERDAMPTGQ LIMDLLKVVL PPFALIFAVL
GSIIGGIAAP TEAASMGALG ALLVVILSGR FSYHVIRETV YSTFKISGMT FFVLIMAQIF
SLSFRGLGGD DLIDSLFEFL PGGVWGALIF MMVLLFLLGF FLDWIEISYI VLPLMLPFFH
HAGIDLVWLS ILIAMNLQTS FLTPPFGWSL FYLKGVAPKE VLTQDIYRGV MPYIGIQAFA
LTLVMIFPGI ATWLPGVVGW
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