Gene Hneap_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0822 
Symbol 
ID8533963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp892946 
End bp893566 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content56% 
IMG OID646383210 
ProductCRISPR-associated protein Cas4 
Protein accessionYP_003262715 
Protein GI261855432 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAC CGGACTCTGT CCCACTATCT GCTCTGCAAC ACTGGGTGTA TTGTCCACGC 
CAGTGTGGGC TGATTCATCT GGAACAGGCA TTTGAGGACA ACATCCACAC CGCGCGCGGG
CAGGCAGTGC ATCACTTGGT CGATACGCCG GGTTATGAAA TCAAATCCGG TGTGCGTGTC
GAGCGCGCGT TGCCGTTGTG GAGTGACCAG TACAACCTGA TCGGTAAAGC CGATCTGGTC
GAATTTCACC CGGATGGCAG CATCTATCCC GTTGAATTTA AGCACGGTGC TAAGCGGCAA
AAATTGCACG ACGACATCCA GCTCGCCGCG CAAGCGATTT GCCTGGAAGA CATGCTGGGC
CGCCCGGTGC CCAAAGCGGC GATTTTCCAT GCCAGCAGTC ATCGGCGGCG GGAGGTAGCA
ATCACACAAG CACTTCGCGA TCTGGTTCTT GCAACGGCGG AAGACATCCG CGCCATGCTC
GCCTCAAGCA AACTGCCGCC ACCAGTGAAT GACGCACGCT GCAAAGAGTG TTCGCTGAAA
GAAATATGCC AGCCCGAGGC ACTGGCCGAG CAGATGCGGC TGCATCGTTT GCGTGAGGAG
CTGTTTAATG TGGCGCAATA A
 
Protein sequence
MNEPDSVPLS ALQHWVYCPR QCGLIHLEQA FEDNIHTARG QAVHHLVDTP GYEIKSGVRV 
ERALPLWSDQ YNLIGKADLV EFHPDGSIYP VEFKHGAKRQ KLHDDIQLAA QAICLEDMLG
RPVPKAAIFH ASSHRRREVA ITQALRDLVL ATAEDIRAML ASSKLPPPVN DARCKECSLK
EICQPEALAE QMRLHRLREE LFNVAQ