| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0815 |
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| Symbol | |
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| ID | 8533955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 883540 |
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| End bp | 884700 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646383203 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003262709 |
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| Protein GI | 261855426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAGC TAAAACACAC ACAGCCAGCC GGTGGGTTGC CCTTGCGCAA CGGTTTAACG
TCGCCCGGTT CTGTTATGAC ATCCGGCTTG GTCTTGGTTT TGGCTATGGC CATCACGGGT
TGTCAAAAAC AAAGTGCCGA GGTCGAGTTG CCGCCACCTG TGGTGCGCGT GGCCACCATT
GCGCCAGGTA CGTTGGCACA ACCCGATTTA ACGGGCGTGA TCGTGGCGAA AACCCAATCT
GCCGTGGGCT TTCAAGTGAG TGGGCGAATT GCCGAACGCG TGGTTAAACG CGGTGCAGGG
GTCAAAGCGG GCGAGGTGCT GGCAACGCTC GATGATGCCG ATTTCAAGGC AAAGCAGGCA
GCCGCTTTGG CGCAAGCACA GCAGGCCCAG GCCGAGGCTC GGTTTGCGCA GCAAAACTTC
ACGCGTGTTC AATCCCTGCT TGCCAAAAAA CTCGCCAGCC AGCAGGAATA CGATCAAGCC
AAATCCAATC TTCAAGCCGC CAAAGCAAAC GAACAGGCCA GCCAAGCGCA ACTCGAACAA
GCGCGGCTGG CATTGGGATA TACGGCACTT AAAGCCCCGT TTGCCAGTGT GGTTGCTGCT
ATTGATGCCG ATCAAGGTGC GGTGGTTAAT GCCGGGCAAC CGGTGGTGAC GCTGGCGGCA
GGGGATGCCC GGCAAGCGCT GGTGGCTGTG CCTGAACAGC GTTTAATGCG CCTGCCGAAT
ACGGCCCAGG CGCGGGTTCA TGGCCAATCG ACCGCCATCG AGGCGACGTT TGCCTCAAAC
GAAGGCGAAG TTGATCCGGC CAGCCGCACC TGGTCGGTTC GGTTTAATCT GGCAGCTAAT
CCTTCGGTGA AAACCGGTTT GGGTCAGAGC ATCACTCTCT CTTTCCCCAA GCAAACTGTA
CCGAAGAGTG TGCCGATTAC GGCGATATTG GGGCAGGGCA GTCAGGCGGC CGTATTCGAG
GTGCGGCAAA ATGGCACGGT GAAGATGCAG CCGGTGACCG TGACTCGGCT CGAACACGAG
TCGGCGGTGA TTTCAACCGA TCTGGCTTCC GGCACGCGCA TCGTTGCATT GGGCGTGAAC
CGTTTGCATG ATGGCCAGCG CGTGCGCATC CAGCCCGGTT TGGGCACGGA TACGGCACCA
AACACCGAGG ATACACCGTG A
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| Protein sequence | MIELKHTQPA GGLPLRNGLT SPGSVMTSGL VLVLAMAITG CQKQSAEVEL PPPVVRVATI
APGTLAQPDL TGVIVAKTQS AVGFQVSGRI AERVVKRGAG VKAGEVLATL DDADFKAKQA
AALAQAQQAQ AEARFAQQNF TRVQSLLAKK LASQQEYDQA KSNLQAAKAN EQASQAQLEQ
ARLALGYTAL KAPFASVVAA IDADQGAVVN AGQPVVTLAA GDARQALVAV PEQRLMRLPN
TAQARVHGQS TAIEATFASN EGEVDPASRT WSVRFNLAAN PSVKTGLGQS ITLSFPKQTV
PKSVPITAIL GQGSQAAVFE VRQNGTVKMQ PVTVTRLEHE SAVISTDLAS GTRIVALGVN
RLHDGQRVRI QPGLGTDTAP NTEDTP
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