| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0570 |
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| Symbol | |
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| ID | 8533705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 608062 |
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| End bp | 608937 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646382959 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_003262471 |
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| Protein GI | 261855188 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCG CCCAACATCC TGTTATGCCC CGCACCCTGC CGGTGGTTGG GGATTCGTTG
CAGCAGTATC TGGCGGAAGT GCGCCGCATT CCGCTTCTGA CTGCCGACGA AGAGCAAAAA
CTGGCCGAAC AGCTGAAATC CACCGGGGAT ATCGATGCTG CGCAAAAGCT GATCATGTCC
CATCTTCGTT TTGTGGTGCA CATTGCCCGC GGTTATCGTG GTTATGGCTT GCCGCTGGCC
GATCTGATTC AGGAAGGAAA TATCGGCCTG ATGAAGGCCG TCAAGCGATT TGAGCCGGAG
CAGAAGGTTC GTCTGGTCAC ATTTGCCGTT CACTGGATTC GCGCAGAAAT TCACGAATAC
ATCCTGAAAA ACTGGCGCAT CGTCAAAATT GCGACCACCA AGGCGCAGCG CAAACTCTTC
TTCAAGATGC GTCAGATGAA GAGCGGTCTG GGCTGGTTGA CCGCGGATGA AACACGCGCC
ATTGCGGCCG AGTTGAACGT GCCGGAACGT GAAGTCGTGA CCATGGAATC GCGCTTGTAT
AGCCATGACA TCGCCATTGA TGCGCCAGTT TACGACAGTG AGCAGGAAGG CAGCGGGCCG
TCCTACGAGC AAATTCTGGT TGACCAGCAT CAGGTGTCGG TCGAGGACAT GACTGCGCAG
CGCGATGAAG ATGATCGCGT CACCGCCATG ACGCATGCGT TGCACGATCT CGACGCGCGA
AGCCGCGATA TTCTTGAACG TCGTTGGCTG CAAGAGCCCA AAGCGACGTT GCAAACGTTG
GCAGACGAGT ATCAGGTATC GGCAGAGCGG GTGCGCCAGA TCGAAAATGC GGCGTTGAAG
AAACTCCGCC TGGCCTTGCC GGCACCCAGT CATTAA
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| Protein sequence | MNTAQHPVMP RTLPVVGDSL QQYLAEVRRI PLLTADEEQK LAEQLKSTGD IDAAQKLIMS
HLRFVVHIAR GYRGYGLPLA DLIQEGNIGL MKAVKRFEPE QKVRLVTFAV HWIRAEIHEY
ILKNWRIVKI ATTKAQRKLF FKMRQMKSGL GWLTADETRA IAAELNVPER EVVTMESRLY
SHDIAIDAPV YDSEQEGSGP SYEQILVDQH QVSVEDMTAQ RDEDDRVTAM THALHDLDAR
SRDILERRWL QEPKATLQTL ADEYQVSAER VRQIENAALK KLRLALPAPS H
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