| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0564 |
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| Symbol | |
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| ID | 8533699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 600968 |
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| End bp | 601996 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646382953 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003262465 |
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| Protein GI | 261855182 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGC CACTCGATCT ACGCGATTCC GATATTGTCC TGCTGTCCAT TCTGGCACGG
GAAACTAACC TGCCCCGCTT TTTCCATATC GCGGCCAACG CGGCAGCAAA AATCGTCGGC
GCCGATGGTG CCGGCCTTAT TCTTCCTGAA GGAGAAAAAT TAAAGTATCG CTTTTTCGAG
GGCTTACCGC CGCAATTTGT TGCACTATCT CAACACGCGT TTGATCGCAG CACGGGCGTC
GCTGGAGCCG CTTTGGCCCA AAACCACCCG CTTTTTATCG AAGACTATCC CAATAGCGAC
CTGGCCTTAC CCCATTTTGT CGAATCCGGC TTGAAGGCCA GCTTGAGTAT TCCTATTCGC
ATTAGCGACC AAATTGAAGC AGTGCTTGCA CTGTCTTGGT TCAAGCCTGT CGGACAATCA
ATGTCCATGC GCCAACTCAG CCTGGCAACG CTCTTCGGTG ATTTTATCGG GACCGCCCTG
TATCGCGACA AGATCGAGCA GCATCTCAAT CGGTTGGCGC ACAGTGATCC ACTTACCGGC
CTGCCGAATC GCGCCGGTTT TTATCCCTTA CTGGATCAAG CGATACTTCG GGCTCAGGAC
GGAGATCGGC ATGTGGCACT AGCCATCATC GACATCGATC ACTTCAAGAC CGTCAACGAC
ACGCTGGGTC ACGAGTTCGG CGACCGCCTG CTGATGGAAA TAAGCAGCCG ACTGGCAGAA
GCCTTGCACC GCGAAGACAA GATTGCCCGT TTGGGCGGTG ATGAAATCGC CATACTGATC
GAGTCGGCGC GACACCTCAA AGATCTTCAG GATATCGTTC GCCGTTTATC GCAAGCGCTC
TATCTTCGCA TTGGGCGGGA TGGCGAATAT GTGCGCATTT CCGGCAGCAT CGGCGTCTGC
GAGATCCATC CGAAGGAAAC ACGCAACCAG AATACCTTGA TGTGCGCCGC CGACTCGGCC
ATGTATCAGG CCAAACGTGC GGGTGGCAAC TGCGCGGTAT TCTCAGCCCC GCCACAACCG
GATTTCTAA
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| Protein sequence | MQEPLDLRDS DIVLLSILAR ETNLPRFFHI AANAAAKIVG ADGAGLILPE GEKLKYRFFE
GLPPQFVALS QHAFDRSTGV AGAALAQNHP LFIEDYPNSD LALPHFVESG LKASLSIPIR
ISDQIEAVLA LSWFKPVGQS MSMRQLSLAT LFGDFIGTAL YRDKIEQHLN RLAHSDPLTG
LPNRAGFYPL LDQAILRAQD GDRHVALAII DIDHFKTVND TLGHEFGDRL LMEISSRLAE
ALHREDKIAR LGGDEIAILI ESARHLKDLQ DIVRRLSQAL YLRIGRDGEY VRISGSIGVC
EIHPKETRNQ NTLMCAADSA MYQAKRAGGN CAVFSAPPQP DF
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