| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0397 |
|---|
| Symbol | |
|---|
| ID | 8533519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 413008 |
|---|
| End bp | 414048 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646382776 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003262301 |
|---|
| Protein GI | 261855018 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGC AGGCAGCCCA AGTTTCACAC CAAGGCCCTT GGCGGCGGGT GTGGCAGCGA
TTTGTGCGTC ATCGCCGTGG CTACCTGAGC CTGTGGCTGT TTTCAATCCT GTTCGTGCTG
AGCCTCGGGG CAGAATTATT AGCCAATAAT CGCCCCTTGT TGGTGTATTA CCAGCATCAA
CTCTACCTGC CGCTGATTCA CAATTACCCC GAAACCACCT TCGGCGGCGA TTTTGCGACT
AATGCCGATT ACACCGACCC TTATGTGATC GGCAAAATCC GTGAACACGG CTGGCTGCTG
CGCGCGCCGA TTCCGTTTTC CTATGACACC ATCGACTACT ACAACCCCGC CCCGAATCCC
GCGCCGCCCA ATGCGCGGCA CTGGCTCGGT ACCGATGATC GGGGCCGCGA CGTGGCTGCT
CGGCTGATCT ACGGTTTTCG TTTGTCGGTG CTGTTCGGTT TTGCGCTCAC GGCCATCGGC
ATGGTGATCG GGATGCTGGC GGGTGCGGTG CAGGGTTATC TTGGCGGCAA GGTCGATCTG
TTTTTTCAGC GCTTTATCGA AGTGTGGGGT TCGCTGCCCG AACTGTACCT GCTGATTATT
TTCGCCTCGA TCTTCCAGCC CTCGATCGGC TTGCTGTTGA TTCTGCTTTC GCTGTTCGGC
TGGATCGGCT TGTCGGATTA TGTGCGCGCC GAATTCCTCA AAGGCCGCAA TCTGGAATAC
GTGCGTGCCG CCCGAGCGCT CGGGGTGTCC GGCCCGCGCA TTATGTTTCG GCACCTGCTG
CCCAATGCAC TCACCCCCGT TATTACCTTT TTGCCGTTTC GGGTATCGGG CGCGATTCTG
GCTTTGACGA GTCTGGATTT TCTGGGCCTG GGCGTACCGC CTTCCACGCC CTCACTTGGC
GAACTGCTGG CGCAAGGCAA GAACAACATC GATGCCTGGT GGCTATCGCT CACCACATTT
GGCGTGTTGG TGGGCACCTT GCTCTTGCTG ATTTTTATCG GCGAAGCCTT GCGCGCCGCG
TTCGATACGC GACAGAAATA G
|
|---|
| Protein sequence | MSEQAAQVSH QGPWRRVWQR FVRHRRGYLS LWLFSILFVL SLGAELLANN RPLLVYYQHQ
LYLPLIHNYP ETTFGGDFAT NADYTDPYVI GKIREHGWLL RAPIPFSYDT IDYYNPAPNP
APPNARHWLG TDDRGRDVAA RLIYGFRLSV LFGFALTAIG MVIGMLAGAV QGYLGGKVDL
FFQRFIEVWG SLPELYLLII FASIFQPSIG LLLILLSLFG WIGLSDYVRA EFLKGRNLEY
VRAARALGVS GPRIMFRHLL PNALTPVITF LPFRVSGAIL ALTSLDFLGL GVPPSTPSLG
ELLAQGKNNI DAWWLSLTTF GVLVGTLLLL IFIGEALRAA FDTRQK
|
|---|
| |